>PF15661 (649 residues) RRTRSLDRSQSPKKVRRCFSMPTTPSRRMLHQAASDGSRCPQSPAQSVEAQDATATAHSL EETREFLPTDQRLPQDTKKEKTQRRGQQGWLKTLMNFLLRTGPEEPKEKASRKAKGKEGL PKPAETPEAPGETAPRKKAHDKKASRKKHSHKKHVAEETKGAQDQKAEGQEIGLPKMAAA PRPEEADLGPAPKGGKGSGLHQSLLIEAGGPAASEVSSQATGHRPEEELRKLDQDKIIKM IVEFLQKVGDQWEEEQLQAPQPEVVVQIPVSVDRKKFQEKKSSFKRAFSHKKHGSEEAKR AGPADVSSLESRPPKRPSFLPLCVGGHQPSTSSSPGSEEPKVQEVLPTDSGGLSHLELST PAGSQGPEEDLQANRALEFREFIQKIIALLQDAEEQGGEFLSSPPQQLRVQEPEVAVENL SPPYRRRTQEKKSSLRKAFSYKRHGPKGSRRAGAAGAASPESRPPKRPSFLPLCVGGHQP STSNSPDLEDVEFQESSPAEEAPVGSSDAPSQTRSHQPEGGPQPDGVFESKELVIQNLVA LLQEVDGQLGEQIRRHPSFKKFFYKVSDSSLRKLAATLHSQKACSTELGRNLTKRPYQLA FGFTNKFASNNSHAVFSLMGLCYSHASYTHFPYREAQQNITNPDSQSPD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RRTRSLDRSQSPKKVRRCFSMPTTPSRRMLHQAASDGSRCPQSPAQSVEAQDATATAHSLEETREFLPTDQRLPQDTKKEKTQRRGQQGWLKTLMNFLLRTGPEEPKEKASRKAKGKEGLPKPAETPEAPGETAPRKKAHDKKASRKKHSHKKHVAEETKGAQDQKAEGQEIGLPKMAAAPRPEEADLGPAPKGGKGSGLHQSLLIEAGGPAASEVSSQATGHRPEEELRKLDQDKIIKMIVEFLQKVGDQWEEEQLQAPQPEVVVQIPVSVDRKKFQEKKSSFKRAFSHKKHGSEEAKRAGPADVSSLESRPPKRPSFLPLCVGGHQPSTSSSPGSEEPKVQEVLPTDSGGLSHLELSTPAGSQGPEEDLQANRALEFREFIQKIIALLQDAEEQGGEFLSSPPQQLRVQEPEVAVENLSPPYRRRTQEKKSSLRKAFSYKRHGPKGSRRAGAAGAASPESRPPKRPSFLPLCVGGHQPSTSNSPDLEDVEFQESSPAEEAPVGSSDAPSQTRSHQPEGGPQPDGVFESKELVIQNLVALLQEVDGQLGEQIRRHPSFKKFFYKVSDSSLRKLAATLHSQKACSTELGRNLTKRPYQLAFGFTNKFASNNSHAVFSLMGLCYSHASYTHFPYREAQQNITNPDSQSPD | |||||||||||||||||||
1 | 1vt4I3 | 0.08 | 0.07 | 0.92 | 1.03 | CEthreader | ---------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
2 | 5yfpB | 0.07 | 0.07 | 1.00 | 1.19 | SPARKS-K | GDEQLLRKTINPTAQDSSKKESRAYLNDESLSYIRDPLNGQEMSKELQHLPNDSMRLNYLVNSKQFNVKAKQDSFNDLNNDSDIQDQSIHLKQLVNFTKYVKIKNKLDQIYKEFDEKTNEKNQCDSPKENQINVESLNKKVDEVIRTTTFDNYQKILNYQATKKFIELNKFYFNLPKSLKRCLTNNDFNEFIIEKGLTLRRRFNQSSDASQSLVIKRIWTQIENLLVTYKDLIWNSLIQPQETILSLFSKLLNLENFIKNTTSSSNENPILRWMSIKMNGFQNELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELYYLKINQLFQIISDTGKDSEGLKSTVEPNKVNTIYLNLNCQPSSQGLTDSPTIIEMWLLILKYINDLWKICDQFIEFWEHIEKFLDGTYQNSIINEKRKENILIGDSNIIESYEEFITSVSQNLISSSLKDSTGDITRSNKDSGSPLDYGFIPPNCNGLAQLNITTNGITILRDISNFYQLENWQVYETVTFSSKSQDSSKNLTFEYGVTQEIVFQEVSIKTTRDLLFAYEKLPIINYPSKQLLTGIEIQQIISMEAVLEAILKNAAKDKDNPRNSHTILTLTNLQYFRECAFPNILQYFDDAFEKNLELFSLLSKMESSIFGNYLSDLK | |||||||||||||
3 | 5ch1B | 0.07 | 0.06 | 0.80 | 0.68 | DisCoVER | ----KAIDARPPTMDVKFKQHSGEYGKSRN-SGRRFQYPV-----VCIKPDREPVPHAEIRKNISQLDSKSGFAQYAATLAPYLEPWLRK------LNIECTKSNLI-RFMASQPETPQQKSNLLTYSDDAVRNASMFT---EAWDRVFNDQRRVALRDILMLDKNVEPIFEALMQKVIALGS----YTTLGCLIC--FSHDCEHGEIERDNKRCFSLEEIGGLMPSLPCRNE-CYI-HG--TPPWSENEVGTLEWMFATIGPECFVGLRPCWDVHRLQELDLRLPIPKQKSLP---WYDRRKQLMSDWAATITRELFAPCHHGPCTACPCASAGTHPVLCERCLCTAECPLKFTGCACHSSGKTCLQRPCICVQLRECDP--T-----------------------------------LCKGC--------------GARERADPENAYLHSTGCQNVALQRGAAKAVVLGKSQYGLFAAEDIEEGEF-VIE---------YTGELISHDEGYLFTL---LEQEGIWVDAA--IY--GNL-SR----------YINHATDGNIMPWRIKFTAIKDI-KAG--EE----LFFNYGKLLLVPKTT---------QPLFDPLKVQLLPGPLPIDDILRRHISSEQYLPRY- | |||||||||||||
4 | 2xsgA | 0.06 | 0.04 | 0.60 | 0.67 | DEthreader | -----------A-DYASLVDVFVGTEGDFGNDMPAAQA-------------NPRT---TP---GRNNTGYDY--AQSKIS-G---FTHTNLDGGGGGDLLVVPTSYAH-FS---HDDEDAG--PGFY----SV----G---LGN-VAGTDGAITGAPGTIEAEVGVHRYAFPA-G----S-TPSLV-VDLE-----T--NNTSR----RSSSVQV---------TVELS--GQ--VTGYFYNAAY-----WGDDDRLVDATA--QDGVDTLSPSVEQARIDQQVELG-LSFDAIRDRT------RAEWNATLGRVAFHLYRMF-AMPMNATSTSGTYHAAQGFTYY---VIAYIDPALYRD--------MVQSLVYLFA--------------------------GLGGFVHSVPT-----------------VRW-ERSSVVVA--A---GFDGFDRLDYLDQYGL-------------LLTHFEAAGLYQGTQFDDGKAMHSNANRYIATG--SSS-AVPS---GG--GE--------------------------------------------------PLKTKVYRDPRGMLPTMDNDAGT---------MSTMFV---AAAVGLFPV----------------- | |||||||||||||
5 | 2gahA1 | 0.09 | 0.07 | 0.83 | 0.77 | CEthreader | ---------------------------------------------------------------------------------------------SKPQRLSAEQSSRARINREEALSLTVDGAKLSAFRGDTVASALLANGVRRAGNSLYLDRPRGIFAAGV-------EEPNALVTVSARHEQDIDESLPATTVPVTEDLNATLLSGLGVLDPTKDPAYYDHVHVHTDVLVVGAGPAGLAAAREASRSGARVLLDERAEAGGTLLDTAGEQIDGDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERI---WHIRAKQVVLATGAHERPIVFENNDRPGILAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAAAAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQGKLDWDTTIHAFVPADAVANQHLA-----GATGRLDTASALSTGAATGAAAATAAGFATVARTPQALETALGETRPVWLVPSVSGDDAVNYKFHFVDLQRDQTVADVLRATGAGKSVEHIKRYTSISTANDQGKTSGVAAIGVIAAVLGIENPAAIGTT | |||||||||||||
6 | 5oqrA | 0.07 | 0.06 | 0.96 | 0.92 | EigenThreader | ISSSQTSIAGHRKLCNKLFTLRTQGFETDILRALNIILTVKKG-------NSNADRVLRFLVTFVNYLQQKDPEIDIVQPILKHILRGLDYRCCQIIARVVNCVKEEKLLSRVLDRESIVRLEAVVALSRLQENSSEVRRSVLLNIEVSNSTILERARDVDAANRKCVYARVLPKLNDRDESVEKAAADMLAYQLDVSNNSDVAVLAIKKFFDVRVDSLSQLEFPEQFWLELTAESSLLARTFNEICIEKNYYIERQYVSL-----RDKSSYDESCFIIEQLLYIGLSQDMVDEIGRRKLLKSLTNSLSTMALPDSLISLHIELLRKLCSSENDFCSLLVEIITEVFEQGHAFNELRCLSYVQCLFENITSSLNENLYMVDMLKTLIIPAVR---------------SHDLPIREKGLECLSLVCLLNADLAFENVPLYLHCYEKGSVVLKCTAIRTLTDMLIQHGKEDAISSILFEALGEFENAELQTLGAEAIAKLLVILHYRDELFLKPLIIQYFEPNTVDNHALRQVLGYFFPVYAFENQWRIATIFCDALLSLLEIYRDDDVQLSIGHIAQQMLDWTDNEKLYERGDDYIALNHNVHLHLANMIFESLPNLGKLKIPTDLPSSDYQRTKRKLETYESHGFTMDS | |||||||||||||
7 | 4jrbA2 | 0.14 | 0.01 | 0.09 | 0.34 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGVGITGLIDDVLAILEDLKALFNEKLETSPDFLALYNAIRSPEFQSIVQTLNAMPEY----------------------------------------------------------------- | |||||||||||||
8 | 2ve7B | 0.14 | 0.05 | 0.35 | 0.48 | MRFsearch | -------------------------------------------------------------------IKDPRPLNDKA-------FIQQCIRQLCEFLTENGYAHN---------------------------------------------------------------------------------------------------------------------VSMKSLQAPSVKDFLKIFTFLYGFLCPS------------------YELPDTKFEEEVPRIFKDLG--------------------------------------YPFALSKSSMYTVGAPHTWP---------------------------HIVAALVWLIDCIKIHTAMKESS------WGEETE---DGIMHNKLFLDYTIKFDEMNAELQSKLKDLF-------------------------------------------------------------------------------------NVDAFKLESLEAKNRALNEQIARLEQERSTANKEIRKIYGEKLQFIFTNIDPKNP---------------------------ESPFMFSLH------------------------------ | |||||||||||||
9 | 6x02A | 0.12 | 0.10 | 0.83 | 0.80 | FFAS-3D | --------------------------SDTLKEFKIE-----QDPFNIIREFRSAAG----QLALDL--ANSGDESNVISSKDWELEARFW--HLVELLLVFRNADLYQIWIVMVWLKENTYVMERPPTSKWLNSNVLDVKDKEEDHILAGAIDEALEEAKLSDNNPVIDTKHSLWRRTVYSLSQQAGL---------DPYERAIYLSGAIPNQEVLQYSD------------WESDLHIHLNQILQTEIENYLLENNQVGTDELILPLPSHALTVQENRVASRHPSESEHPIRVLMASVILDSLPSSSVEMLLDDKPYLLRIVT--HLAICLDIINPGSVEISLLKLQGLYENIPTFLNESDCLEPQVRKKQIETILPASNILRRTTQRVFDETEQEYSPSNEISISFDVNNID------------------MHLIYGVEW---LIEGKLYVDAVHSIIALSRR-----FL---LNGRVKAFMERNNIGEICKNYELEKIADNISKDENEDQFLQKSVSLLSSESNIPTLIEKLQGFSKDTFELIKTFLVDLTADYEILYEIRALYTPFLLMELHKKLVEAAKLLKIPK------FISEALAFTSLVANEND----KIYLLFQSSGKLKEYLDLVARTATLS------- | |||||||||||||
10 | 5yfpE | 0.09 | 0.09 | 0.97 | 1.19 | SPARKS-K | -SLYELD-PKWKKLLKTDNFLGGLTVNEFVQELSKDHRNDVLIDANTKNLPTNEKDQD--AIREAIW-----KQLDPKPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVS-PLGDKLETAIKKKQNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNWKLNLKS-------VKLMKNLLILSSKLETSSIPKTIKLVIEKYSEMMENELLENFN-----SAYRENNFTKLNEIAINNFNGGVNVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETSMQNLIKNESKIVKRVFEEKATHVIQLFIQAQKIEPRFEVLLRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQLLEIDDSNQILSTTLEQCFADLFSHYLYDRSKYFGIEKRSLEAILVDMTSKLDKYKEKLSTNTASDIDNSPNSPANYSLNDVDSMLKCIPNKAHLYILEILKIMFLGIVDSYMEIAAYWKICKVDINKTAGVVNLNFLKFISMSTEILDLLSISIKSIFLPLLSQIQKMEILINIISTKFSAILCKQKKSQELLDQDIVNILNLIFEQSSKFLKGKNLQTFLTLIGEELYGSHYSHFQYQTAIEDWGVASLIDKF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |