Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | CYAPDSEGNQIICPQRESIVNVFSKSATFDNPEVFGQDLFSKCLPLTWHDRPSVVCDGQETTFIYTPIQSLRVFDMVDGWLLLARIAPAALRNLK |
1 | 4dtdA | 0.06 | 0.05 | 0.81 | 0.70 | DisCoVER | | VVAPASAQKFGYVKSAQDALFLTKD--------------NQGSYQRPLGKNYQNWQT---HTVELVSYPCEAVETRKQAHQVIEITNAKHVIAA- |
2 | 3lnuA | 0.09 | 0.08 | 0.92 | 0.83 | DEthreader | | ----MLPLFVGSLKKDTEIVDWAALVQESYPTAQHGTHVN-RSTDREFCFR-LPVWDR-VTFVLSL-KMPRLSRQAAGIEGAAHDAFSLYLNQNV |
3 | 4yhcA1 | 0.05 | 0.04 | 0.82 | 0.43 | CEthreader | | FWMPGDEWKNFELVVQVFSLTIEIEGADIAVEKFQLSSPIIKSISIVSPTANRIASLTESGEVTVYSKKGPVWSPKIL----------------- |
4 | 3cewA | 0.02 | 0.02 | 0.89 | 0.62 | EigenThreader | | YQKSVAQDARVELLTGAEVSINHLPAAGVPFVHYGILSGKGFITIDGIAPDGKRSAASDSPIGFLCIQ----VKAGSLEGYTTDGVVQL------ |
5 | 1q7lB | 0.12 | 0.07 | 0.63 | 0.22 | HHpred | | -------------------------------IMPAAGD----NRYIRAVGVPALGFSPMNPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPA |
6 | 3kjpA1 | 0.08 | 0.06 | 0.77 | 0.63 | MRFsearch | | ----------------KLTCLLFSGN-----YEALPIVRFHRLKIQVYKKETQGITSSGFASLTFEGRTSSKYFNFTTEDHKMVEALRVWASTH- |
7 | 1trjA3 | 0.08 | 0.06 | 0.79 | 0.33 | FFAS-3D | | -EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL------------------- |
8 | 3s8vA1 | 0.06 | 0.05 | 0.87 | 0.71 | SPARKS-K | | LTIDYAKRRLYWTDLDTNLIESSNML---GLNREVIADDLPHPFGLTQQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDI--------- |
9 | 1m2vB | 0.09 | 0.07 | 0.83 | 0.59 | CNFpred | | ---------LCAFSTM-SYLFEVNVDESIMADYCYV---QVAVLLSLNNSQRRIRII---TLAMPTTESLAEVYASADQLAIASFYNSKAVEKAL |
10 | 5llwB1 | 0.03 | 0.02 | 0.84 | 0.83 | DEthreader | | --IHIPN-AIQP------FGA-LIVEQQIKQNINILAAIENEPIWVETDRLSFLGWRHENYYIIEVE-R--YHVQ--IGRRIRRLLVRTVEFAAE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|