Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | GNEGERRAGIDPATGKQRIYPQNPVGKPKYRIPDGRNDVTKQITEVKNVNDIKSKDSKQIIDEANWAAQNGYTMTLVTDHRTVLSQDV |
1 | 3c25A | 0.07 | 0.07 | 0.97 | 1.17 | DEthreader | | KVCPNRALDQEKLGGELSISKT---DSSPEFSFDWTLAERYGVLEIQTMLSVFKRTFYQMAYKFALSGHQCAGTGFAIPQSVWSWLLL |
2 | 1t0fA | 0.13 | 0.11 | 0.89 | 1.17 | DEthreader | | LSDLELAVFLE--REQFPLPTIASGIKHPVMSTDFLVDCEQFAIQVKPAAALQDETLEKLELERRYWQQKQIPWFIFTDK-------- |
3 | 1t0fA2 | 0.14 | 0.12 | 0.89 | 1.00 | DEthreader | | GSDLELAVFL---REQFPLLPSDTQIAHQVMSTDFLVDCEQFAIQVK-PAALQDRTLEKLELERRYWQQKQIPWFIFTDKEI------ |
4 | 1t0fA2 | 0.11 | 0.10 | 0.91 | 1.17 | DEthreader | | LSDLELAVFLE-IREQFPLLTRQIIDHDQVMSTDFLVDCEQFAIQVKPAAALQDETLEKLELERRYWQQKQIPWFIFTDKE------- |
5 | 1t0fA2 | 0.13 | 0.11 | 0.89 | 1.17 | DEthreader | | LSDLELAVFLE--REQFPLPTIASGIKHPVMSTDFLVDCEQFAIQVKPAAALQDETLEKLELERRYWQQKQIPWFIFTDK-------- |
6 | 1t0fA | 0.14 | 0.11 | 0.83 | 0.31 | HHpred | | ----AIDSGIKHPVIGVQVMSTD----FLVDCKDG-P-FEQFAIQVKPAAALQERTLEKLELERRYWQQKQIPWFIFTDKEIN----- |
7 | 2wj0A | 0.15 | 0.15 | 0.98 | 0.80 | DisCoVER | | GTRFERDLLLWKAFAAIRVAGSGVSPFPC-PDIVAGNGRTYLAIEVKMRKELLYLSADEVEQLVTFARGFGAEAYVALKLPWRVNFK- |
8 | 1t0fA2 | 0.16 | 0.12 | 0.80 | 0.63 | MRFsearch | | --QIAIDSGIKHPVI---------RGVDQVMSTDFLVDFEQFAIQVKPAAALDERTLEKLELERRYWQQKQIPWFIFTDKE------- |
9 | 1ptoF | 0.09 | 0.08 | 0.89 | 0.78 | SPARKS-K | | ----------LPTHLYKNFTVQELAGKNQEFCLTAFMSGRSLVRACLSDGHEHDTWFDTMLGFAISAYALKSRIALTVEDSLQICPLN |
10 | 1t0fA2 | 0.11 | 0.10 | 0.93 | 0.97 | MAPalign | | LSDLELAVSVLDIREQFPLPTAIDSGIHPVMSTDFLVPFEQFAIQVKPAAALQDERTEKLELERRYWQQKQIPWFIFTDKEI------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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