Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | DYFSNKGKFIRRTETKTNNIYISINGKNILPSQLDLKIKRNRQVMANIVGHYATAVGISYWGKGKMAVGRNPQGMVGIADTKNEAELAATRGANITISVYKGHISRFMNNYENLQSSLYHESIHKFFSLRGDYSDNTSLGHVMKVHIKQFENEHFKSATQEFQQAIIGQAAIYLTAALRDSKTRGQVPGAIKKINTAIRNTPYELV |
1 | 3dteA1 | 0.03 | 0.01 | 0.35 | 0.65 | DisCoVER | | -AKAR-RELAAS----YGAGLPGRDTHSLHG-----------------------------LDGITLTF--PGQRDGAYDPE-HHVILINSQVTLAHEISHALLLLCNVGAL----------------------------------------------------------------------------------------------- |
2 | 3ig5A | 0.05 | 0.04 | 0.80 | 0.83 | DEthreader | | DELEYELEATPASPYLNYVV----R---VTF-QAPNKARYLYDALVNFAPIMLAFSAAVRWNVSSSVDLIHFAHL---------WQTLRFKPWRVEFRPFEVQENAAYSV--LIYLIVDSISINAYSFRNDVETEYEINPNGFPQVTPILCQKGFV-KHERLYYYLKLISD------------------RASGELPTTFLGEI--- |
3 | 3qqcA1 | 0.10 | 0.10 | 1.00 | 0.52 | CEthreader | | VWVCENCGHIALEDKRRRRVYCPVCGEEERISKVEMSYAFKLLLDELKAMVIRPKLNIRKMSAVEVTVPDTIEGGVRMGVIDPPGHFGHIERTVLPVPPVTTLIRAEDDLTHKLVDIIRINNRLKQNIEAGAPQLIIDLWDLLQYHVTTYINNE-APGVPPAKHKSGRPLKTLAQRLKGFEITVQHLFEAAEKGEVDNLNGVIENV |
4 | 5oqlO | 0.05 | 0.04 | 0.96 | 0.68 | EigenThreader | | HAA----PVRCLLPSDFDWLLSGGKDSLWGWAELSQGAIRKKARKMEDLKELSGNTGTGDGEPVSTVAISSCGTFALVGSTGGSIDMFNLQSGRHRQRFPSRFAPGTGRHTSRWQTLLHKARN-----KPKTFTSALPPAAADLELRRALTSRLVARRDYELTQAWMTVFLRLHDLIMENEELLQALGEWREHQARERDRLSELVG |
5 | 4aw6A | 0.10 | 0.07 | 0.76 | 0.31 | HHpred | | -------------------------------APLDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVV---EGSKR------SSHSNAYFYGFFKRIVLF--DTLLEQG-CKNEEVLAVLGHELGHWKLGHKNII-ISQ-M--NSFLFFAVLIGRAFGFSQPTLIGLPYNEVLSFCLTVLSRRGKAKDLYSALIKLNKDNLGFPVS-- |
6 | 1ka4A3 | 0.12 | 0.08 | 0.62 | 0.53 | MRFsearch | | --------------------------------------KYEREWMERVNLWILQKFGFPLGTRARLDVSA-------------HPFTTEFGIRDVRITTRY-----EGYDFRRTILSTVHEFGHALYELDERFMSLGIHESQSRFWENIIGR------SKEFVELIYPVLKENLPF-----MSNYTPEDVYLYFN----------- |
7 | 2wuiA | 0.10 | 0.07 | 0.69 | 0.58 | FFAS-3D | | ------------------------------------SQKTRDGILDAAERVFLEK-GVGTTAMADLADA---------AGVSRGAVYGH------------------YKNKIEVCLAMCDRAFGQIEVPDENARVPDILLRAGMGFLRQCCEEPLLRRRELLEKQGQRFGLRQIRRAVERGELPARLDRMFRAGLDSLRSSPYLLL |
8 | 6w9sA | 0.11 | 0.09 | 0.85 | 0.77 | SPARKS-K | | -------SPQSVFSDSVSSSRLELKKQIIKALDLDYWQGSGGEIMPLVLIDFYKRHNININILNHCKVNNFDKKAINLINAGNHYNALTMRGNIERIDVPGDG-----NCLYHAVVKSHQITRKPKPYGNELQKDKPEWCILKESLKTHFDKD--------F-----DQFVEQVKCILISENT-HEANKILDKVAQYSGVK----- |
9 | 2g47A | 0.09 | 0.07 | 0.75 | 0.64 | CNFpred | | ------GWFVYQQRNNNCGIEIYYQTDMQSTSENM-----FLELFCQIISEPCFN---TLRTKEQLG------YIVFSGPRRANGIQGL----RFIIQSEK-----PPHYLESRVEAFLITMEKSIEDM-----TEEAFQKHIQALAIRRLDK---------PKKLSAECAKYWGEIISQQYNFDRDNTEVAYLKTL--------- |
10 | 4dn5A | 0.05 | 0.04 | 0.85 | 0.83 | DEthreader | | ELVLSVSSGQAHS-----LTSLA-----KTWAARGSRRSTEDNE--GV--LL-TE--KLKPYREEWATHQLR--LGR-------SFGEVHRMQCAVKKVRLEVFRAEELMACAGLRIVPELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGEYLSRRILHGAKVDVWSSCCMMLHLNEIPPSCALTAQAIEGRVSAAELG----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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