Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | QTAHHLIEASALHDKGRGGKGSVPLKGISNYSENKAPCVCAEGVNQNVGTHGLMHTFQSAAAAKSRSGILQLSNGSSISAKKTTYGTAKRQSMAAMGKVFPQSKCSKECLSAQLDNYH |
1 | 5cwdA1 | 0.10 | 0.06 | 0.58 | 0.65 | DisCoVER | | KDARSTCEKAARKAAESNDEEVAKAA---------KDCLVAKQAGM-PTKA--A---R---S--FC-EAAAAAAVAIA-AKACLE--V---A--KQ--AG------------------ |
2 | 6cptA | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | | FTFVY-VYLMIDYA-------IKQVEGFDNIPLNELFIIVRDYKNGNPHNFRHAVDVLQACFHFLIRGLPKFKLIAL--KALNPIQTLGLLVAALGHDVGHPYHSLFIKVLRCWPDLL |
3 | 5xbjA1 | 0.09 | 0.09 | 1.00 | 0.49 | CEthreader | | LDYDDKNKSYSIYYETPDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYMDSLDTFKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEY |
4 | 5t1jA | 0.05 | 0.04 | 0.88 | 0.63 | EigenThreader | | KQGRRMLSFTVAGLEPTSSPNTGAHWMRQEVGKL---KLTNNKGASNNVTMIVLQSLHKYQP--RLHIVEVEAACSASNTHVFTF--QE-TQFIAVT------AYQNAEITQLKIDNN |
5 | 2rqpA | 0.07 | 0.03 | 0.35 | 0.20 | HHpred | | --------------------------------------------------------------------------PGMASSPRPKMDAILTEAIKACFQKS---GASVVAIRKYIIHKY |
6 | 6bq1A | 0.15 | 0.11 | 0.72 | 0.63 | MRFsearch | | ---------------GGGGGGGGGGGGGGGGGGGGGMMQCVI---------AVADKVFDAFLNMMADKAKT---------IHKRIRRVADKYLSGLVDKFPHLLWSGTVLKTMLDILQ |
7 | 1i80A2 | 0.10 | 0.09 | 0.92 | 0.44 | FFAS-3D | | QVGQPVLISDHLNLTARSPLVGGEFVDLTDAQLAEGVYAGLPGPHYETPAEIRMLQTVHETIAARAAGAEVLGVAAGITGEPLSHAEVLAAGAASATRM-------GALLADVIAR-- |
8 | 6w2wA2 | 0.08 | 0.07 | 0.83 | 0.68 | SPARKS-K | | -----------------ENEAAKECLKAVRAALEAALLALLLLAKHPGSQAAQDAVQLATAALRAVEAACQLAKQY---PNSDIAKKCIKAASEAAEEASPDSQKARDEIKEASQKAE |
9 | 4tmuA | 0.12 | 0.06 | 0.51 | 0.46 | CNFpred | | -----------------------------------AEAMLFYD--------PADMAWLRRCLEEKA---------------PGPLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGR |
10 | 6n3tA | 0.10 | 0.09 | 0.93 | 1.00 | DEthreader | | FALPA-GLAI--GALGILVAVHAQPVVTL-GLG-AIDGLFSRFEAVRVMTSGRTVVFSAVIIVASSVPLL---QGFLKSITILIVIWGLSTDYEVFLVSRMGTTGRITGAALILAVVA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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