Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GTILIPCRTAMRGSFPLNGTYFQVNEVFADHDTSCNPIDVPREWIWNLPRRTVYFGTSVPTIFKGLTTQEIQQCFWRGFVCVRGFDQRTRAPKPLYARFHF |
1 | 6de6A | 0.03 | 0.03 | 0.85 | 0.83 | DEthreader | | VRFYQVP-H----CNGGDPAMR-IFTES-MKGLAGFDLITMRVWDLVVDFIGCASI-DP-FLPKKIEDIRECI-GCICCNFMEEW-----RKGWHPMATYH |
2 | 5xmzA | 0.14 | 0.12 | 0.87 | 0.52 | CEthreader | | ENIDIADFNV---RKGEDGTIKYVNFKLSGDDADGLLCEAQN---PGLPSNVITCGESKYRF-------ALSSGKQYEFALSLYHELGLAVGFYGTGEIFT |
3 | 6qzkA2 | 0.11 | 0.10 | 0.92 | 0.67 | EigenThreader | | IDCFIGLAVG----TREKGIHFPACSVLFDK-YGKLINYYKPLISYKYPKNIVIHAGFSRE---NIDWYKEYFDKKGIIIEVKKFIVTSPNPLKIEKTYGD |
4 | 3pt6A3 | 0.15 | 0.12 | 0.81 | 0.30 | HHpred | | ---YRPENTHRS-----YNGSYHTNMLYWSDEEA----VVNFSDV--QGRCTVEYGEDLL-----ESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARS |
5 | 5yaaA | 0.11 | 0.06 | 0.53 | 0.40 | MRFsearch | | -----------------------------------------------LPPIGVFWDIENCSVPSGRSATTVVQRIREREAEFICVCDISKENKEVIQELNN |
6 | 4gl6A | 0.16 | 0.16 | 0.98 | 0.29 | FFAS-3D | | GAIYATCISKNDPKHPFEGSYFNPEEIIYDGYGQRKQESIEEAISQAAENYYIQGDIIIPEEWQDIPVEEISQ--WKNYVSAWVYIDASTKGKTDEEEYQY |
7 | 6sceA | 0.15 | 0.15 | 0.98 | 0.69 | SPARKS-K | | GPLLLALVS--EQAVPLYAAYLHPREVYLLTTPEESRLRWAEAFFRGVRVHRSFLGPWALREVRDLLAPVVEEALRRGHPVHANLNSGTTAALGLYLALRD |
8 | 1djuA | 0.12 | 0.10 | 0.79 | 0.63 | CNFpred | | EEVLIPTPAFYAPAVILA--GGKPVEVPTYEED---EFRLNVDELKKYVTRALIINSPCNPTGAVLTKKDLEEIA-DLIVISDEVY--------------- |
9 | 3qr0A | 0.07 | 0.06 | 0.89 | 0.83 | DEthreader | | --------SHNTYLIYLCRCILSIKNKK-DAGTA-AKEAEAAEMSALVNYIMSSMVETALNKLKDNPED-FVDYNKKQITRIYPKGTRVDSSNYVPQIYWN |
10 | 2rbcA | 0.19 | 0.17 | 0.88 | 0.45 | MUSTER | | GGTVAPARSAL--ST--RGERLIV--PFYDHRLHEKKRACTPEDIALFD--AVLVDVRWPELA----LDVLTVARALGKAILDGDVAPVETLEGLAPAATH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|