>PF15623 (278 residues) MSATGDQDPIQEDRKAPVSQERAQAEAGGDREAGDSGPDSGDMVPVAEVAGVTGPTRGLG EEEGEQAAGLAAAPVVRNPEEDSEIRIEEEEEEEEEERNEAGNFDLVAATRRYPIIGFRV EFLDMVHSLLHRIYHNDHILIGMRGGRLMRRPRTAAPSGSNEPALLLVRERLGVGAMGPE GEGLGLLQEAASVPEPEVPADQAEMTREPAEESAEEASEEHAEEAAEEELAEEAAEEPAT EEAAAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MSATGDQDPIQEDRKAPVSQERAQAEAGGDREAGDSGPDSGDMVPVAEVAGVTGPTRGLGEEEGEQAAGLAAAPVVRNPEEDSEIRIEEEEEEEEEERNEAGNFDLVAATRRYPIIGFRVEFLDMVHSLLHRIYHNDHILIGMRGGRLMRRPRTAAPSGSNEPALLLVRERLGVGAMGPEGEGLGLLQEAASVPEPEVPADQAEMTREPAEESAEEASEEHAEEAAEEELAEEAAEEPATEEAAAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDE | |||||||||||||||||||
1 | 3jw8A | 0.06 | 0.04 | 0.69 | 0.58 | DisCoVER | TPQYLFCRYWKTPKALIFV-SH-GA--GEHSGRYALLVFAH-DH------VGHGQSEGERVVDFHVFVRDVLQHVQLPV---FLLGHS---------------GGAIAILVLISPLVLANPAKVLNLVLPN--LSLGPISSVLSRNKEVYNRAGLKV-----CFGIQLLNAVRVEALPK----------LTVPFLLLQGSADRLC-------------------DSK-GAYLLA---KSQDKTLKIYAYH-VLHK-ELPEVTN--------------- | |||||||||||||
2 | 3og2A | 0.07 | 0.05 | 0.67 | 0.67 | DEthreader | EVSFLLARPG-----YINAEVSGGGFPGWLV-LRT-----LTDNYVAHI-AS-IIAKAQGGPVILYIIVPLVDIYGSLVEFQGGAFDPFGWGEQCSALVNHEFERTFGGTNWGNLG---------------------ASIRE-----DRRIYSKQGFLYVS------------------YLRQAD-------------------------TSNNSYSDYGFHTLSGNLEGLFEGFHLPAKFLYQGKYVGPQTEFPLALKSKSP--IL--TG-R----- | |||||||||||||
3 | 3ei4B | 0.09 | 0.09 | 0.97 | 0.56 | CEthreader | AVGSKGGDIMLWNFGIKKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMV---------VTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNE | |||||||||||||
4 | 4qqxA | 0.07 | 0.07 | 0.99 | 0.62 | EigenThreader | SLDAAAAALVLWNEYLSIAFWAGLHDIGKLTLSGEQRSHAAATGKWLPFALPSLGYPNGGLVTGLVAQMLGGHHGTFHAKHLPCLCTGPAYHVADLLGKATGRPGRFLALP---TMATADQMHTRLKEYARYRVESTLALLHSMAWLPFAATDWLMGRKRGLLAPWAVGTIDQALMAVLRAKHNALRLFGLAGEAHAVDPYMQVLLEQLLRWLGTLSLVKAYLEGARGTPLVKQGTTVAEAQGVYDLLSQHSRFPNRQRTEITATIVDLFGKEGAQSG | |||||||||||||
5 | 2j7wA1 | 0.12 | 0.07 | 0.58 | 0.41 | HHpred | -------------------------------------------------SGV----EGEGHKLGYILRDISKMYADDTAGWDTRITEDDLH----NEEKI---IQQ--------MDPE---HRQLANAIFKLTYQNKVVKVRPTTGTVISRKDQRGSGQVGTLNTFTNM---EALVRQMEGEGVLTKADLVVKPIDD---RFANA---L------LA---------LNDMGKDIPQWQPSKGWHDWQQVPFCSHHFH--------------------- | |||||||||||||
6 | 2pffB | 0.16 | 0.09 | 0.57 | 0.60 | MRFsearch | --QGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGM-------------GMDLYKTSKAAQDVWNRADNVNLTIHFGGETFAGHSLGEYAALASLADVMSIESLVEVVFYYGMIAINP----------------------------------------------------------GRVAASFSQEALQYVVERVGK----------------------------------------------- | |||||||||||||
7 | 6ybtu | 0.19 | 0.05 | 0.28 | 0.46 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVREDIEDLEELDPDF | |||||||||||||
8 | 4mvdB | 0.09 | 0.08 | 0.85 | 0.90 | SPARKS-K | --GLRQPAPFSDEIEV----------DFSKPYVRVTMEEACRGTPRPVRVYADGIFDLFHS--GHARALMQAKNLFPNTYLIVGVCS----DELTHNFKGFTVMNE-----------------NERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHR-------IDFVAHDDIPYSSAGSDDVYKHIKEMFAPTQRTEITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLWEEKSREFIGSF | |||||||||||||
9 | 3pihA | 0.23 | 0.05 | 0.20 | 0.56 | CNFpred | --------------------------------------------------------------GEAQRIKLASELRKRD-------------------------TGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDNTVIVIEH--------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5cskA | 0.04 | 0.03 | 0.68 | 0.67 | DEthreader | NTVDKLEESPL---------TVISKILESVRWAYETFG-T----IIGP-QLLLFGRAPTCTACRRLKLLETED---------HKMTAEKPDPTLAVICGAATKAFFVAKGYDKVSAKNNLILLPLQAREILIQGALPSYVVFLAAYIRYIGKFQLPL---------ALQRNIRT----------------SEANRLMSDILDLNLLRVSGPKRYKAHLDITFKIGSGRGDGLGVEC-R---------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |