Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VTKRVLSARLLKINELRNEVTELHIKLDELQKENRALKRLQYRQEKALNKFEDTENEISQLLARHNNEIRILRERLRKSQERERTTERRLKESEDELYRTKNSLQKLKKLSEDKHLAERDELTKKLASAENRLDESEKRIKDLEKNLELNNSSFQRQLQSEKKKVHEAQEENKALQEELQQLNQKLKEKEREL |
1 | 6z9lA | 0.11 | 0.11 | 1.00 | 1.33 | DEthreader | | EDQQAVTAAKQEQAKLEELAKNAEAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSLLQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTTAKS |
2 | 4iloA | 0.11 | 0.09 | 0.86 | 1.17 | DEthreader | | -------------------------SN-AMH-DALQSILAIQELDIKMIRLMRVKKEHQNELAKIQALKTDIRRKVEEKEQEMEKLKDQIKGGEKRIQEISDQINKLENQQAAVKKMEFNALTQEMTAANKERRTLEHQLSDLMDKQAGSEDLLISLKESLSSTENSSSAIEEEIRENIRKINEEGRSLLSQQ |
3 | 6ewyA | 0.13 | 0.13 | 0.97 | 1.06 | SPARKS-K | | ------DPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSPDEIIATVTAAKTLSASAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA |
4 | 6ewyA | 0.15 | 0.14 | 0.94 | 1.52 | FFAS-3D | | -----------TIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGDEIIATVTAAKTLSASSQA-VMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVA |
5 | 1ciiA | 0.10 | 0.10 | 0.99 | 1.17 | DEthreader | | GKLSAAIAAREKDENTLKLRNADAADGAALAVLDAQQARLLGQQTRNDR-AISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTGKTISPFPGRVIDLGLYKRLNDRNPVVTEVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKE |
6 | 5nnvA | 0.14 | 0.13 | 0.98 | 1.33 | DEthreader | | AK-EEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKKQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALK-EAKEDLSFLTSE-SSSTSGEEKLEEAAKHKLNDK-KT |
7 | 5nnvA | 0.15 | 0.15 | 0.98 | 1.17 | DEthreader | | -AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVEKQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETE-LALKEAKEDLSFLTSE-SSSTSGEEKLEEAAKHKLNDK-KT |
8 | 4uosA | 0.16 | 0.15 | 0.95 | 1.01 | SPARKS-K | | ------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG---VDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKEL |
9 | 2tmaA | 0.13 | 0.12 | 0.98 | 1.48 | FFAS-3D | | --EADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAE-LEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKERAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEL |
10 | 6gy6B | 0.09 | 0.08 | 0.89 | 1.00 | DEthreader | | AAL-NLKHIDNVIVSFTGRTSKLTNKISDISD-MV-I---AERLQDLVTQTES-Q--TE-LQSDIDPKTEKRNKLDADREKIIE-SQDVIRQN-N-IADMFKDFIP--------AIKQAIKQGAEIARKILGKVSEGLKYIDLADARMKLSDQIDQLITETDELKAKIREV-ELRLSGLKDVMQIDTERTTLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|