Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | RWKSTRPDLPAPEPRRMDSSSENSGSDWDSAPETMGDLGPPKTKDSGAQRSSGAAPEPSRESQVEQLGCKRMDSLKWDETVSSTQESGRLEAGETIPKLGWDPVDSGGTRKPGVSPEEGLSPPGPEAPAEKPGQHQKLLGWLRGETGGGAGAPYQYLGDPEECLQISTNLTLHLLELLASALLGLCSRPLRAALDALGLRGPLGLWLHGLLSFLAALHGLHAVLSLLTAHPLHFACLFGLLQALVLAVSLREP |
1 | 2dvwA | 0.05 | 0.04 | 0.71 | 0.48 | DisCoVER | | VSNIMIC------NLAYSGATRTDQDSRTALHWACSAGHTIVEVVNDKDDAGWSPLHIAASAGRDEIVKALLAHVNAVNQNGCTPLHYAASKNRHIALANPDAKDHYDATAMHRAAAKGNLKMVLLASTNIQDTEG-NTPLHLACDEERVEEAKFLVTQG--AS-IY--I------------------EN--------------------------KE-----KTPLQVAKLGLILKRLA------------- |
2 | 6h02A | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | | ----------RPTARINSICG-RC----SLLP---CNSWKFQALLRYVQYSRDVCNMLG----QPGSSEVQTRAVD-HDRPVTY-LYNTLYLLKKLVHAIIGS------GWCLSDTLKCA-----------VPDDTYYCRLIRLVMAGFPAHALHVTCVELMASGVLEPYWIVLHDRIVSVISSSLTSE-WYPFRLFDFACHYEMSCSYTLALAHAVWHHSSIGQL--------------------------- |
3 | 6fesA | 0.12 | 0.12 | 0.96 | 0.49 | CEthreader | | -----------GSDLGKKLLEAARAGQDDEVRILLANGADVNTADETGFTPLHLAAWEGHLGIVEVLLKNGADVNANDERHTPLHLAAYTGHLEIVEVLLKNGAGVNATDVIGTAPLHLAAMWGHEADARAQDKFGKTPEDLARDNGYESVARLARKEIIRAVVDELKELIQNVNDDIKEVEKNPEDMEYWNKIYRLVHTMKEITETMGFSPVALVLEAIMMLVKLMLNSSDLIDAVKKMLDMVTRLLDLMVD |
4 | 5iwkA | 0.07 | 0.07 | 0.98 | 0.58 | EigenThreader | | GCEVHQKGAMGETALHIAALYDNNEAAQVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY-----RPHNLIYYGEHPLSFAACVGSGADIRAQDSLGNTVLHILILQPLLLSYLELVPNNQGLTPFKLAGVEGNEARQILDQAIYVLYIICFTMCCVYVTYAFMVLVTMVMRLTNSDGEVVPMSFALVLGWCNVMKMIFGDLMRFCWQMAVVILGFASAFYIIFQTE |
5 | 3sk9A | 0.27 | 0.10 | 0.36 | 0.33 | HHpred | | -----------------------------------------------------------------------------------------------------------------------------------------AALALWAKSGN-----------------PFHPLLAHMLDTAAVALAVLRMPRTRALYEDWGLPE---EGALAWAAALVGLHDLHGVFTELFLRRL-LKE-KGLANDLAAALGA--- |
6 | 6nt5A | 0.20 | 0.09 | 0.45 | 0.45 | MRFsearch | | ---SLHPSIPCP-----------------------------------------------------------------------------------------------------------------------RGHGAQKAALVL----------------LSACLVTLWGLRYLVLHLASLQLGLLLNGVCSLAEELRHIHSRYRYWRTVRACLGCPLRRGALLLLSIYFYFTWMLALLGLSQALNILLGLK-- |
7 | 1aigM1 | 0.23 | 0.13 | 0.56 | 0.57 | FFAS-3D | | ----------------------------------------------------------------------------------------------------FSQVQVRGPADLGMTEDVNLANRSGVGPFST------LLGWF-----GNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAGLWLIASFFMFVAVW-SWWGRTYLRAQALHTAWAFLSAIWLWMVLGFIRP |
8 | 6xe6A | 0.12 | 0.12 | 0.98 | 0.73 | SPARKS-K | | VCINPKMKLPSLELSEFQVFRSSHELHWGVSPEDNGNPLNPKSKGKLTLDSSFNIASPASQAWILHFCQKLRNQTFFYQTDEQDFTSCFIETFKQWMENSHWSFPYKQEIFELCIMEYHLDSKTPGPRFDINDTIRAVVLEFQSTYLFTLAYLSSAPEGLSNGWFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLTWNI----IISLYAIISIAGTIFVTVGSLVLWELNVLESVTISVAVGLSVDFAVH |
9 | 7a23M | 0.20 | 0.08 | 0.42 | 0.60 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------FGTYGFLRF----------SIPMFPEATLCFTPFIYLSAIAIIYTSLTTLRQIDLKKIIAYSS-VAHMNLVTIGMFSP--NIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLV |
10 | 6e9eA | 0.08 | 0.06 | 0.76 | 0.83 | DEthreader | | ------------------------AGVK--SV-FA-VGTVYIVDTSHV---------LRPEQSVPTDKPLNHIQLIYNILDIEKILAYSNAIYAL----------------FEDFDAFEKFI--GNYRLAFADAFYVLVVYNRPVNYETFISYADS-VSEFTKLIYLLTRFLSGKEKIDSNRFK--QIRYYEACCP---KLDMIAIILYLTVMYIMLKNLVNVNARYVIAHCVEKTVNEFRNTQHLENRFADK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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