>PF15576 (253 residues) RWKSTRPDLPAPEPRRMDSSSENSGSDWDSAPETMGDLGPPKTKDSGAQRSSGAAPEPSR ESQVEQLGCKRMDSLKWDETVSSTQESGRLEAGETIPKLGWDPVDSGGTRKPGVSPEEGL SPPGPEAPAEKPGQHQKLLGWLRGETGGGAGAPYQYLGDPEECLQISTNLTLHLLELLAS ALLGLCSRPLRAALDALGLRGPLGLWLHGLLSFLAALHGLHAVLSLLTAHPLHFACLFGL LQALVLAVSLREP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | RWKSTRPDLPAPEPRRMDSSSENSGSDWDSAPETMGDLGPPKTKDSGAQRSSGAAPEPSRESQVEQLGCKRMDSLKWDETVSSTQESGRLEAGETIPKLGWDPVDSGGTRKPGVSPEEGLSPPGPEAPAEKPGQHQKLLGWLRGETGGGAGAPYQYLGDPEECLQISTNLTLHLLELLASALLGLCSRPLRAALDALGLRGPLGLWLHGLLSFLAALHGLHAVLSLLTAHPLHFACLFGLLQALVLAVSLREP | |||||||||||||||||||
1 | 2dvwA | 0.05 | 0.04 | 0.71 | 0.48 | DisCoVER | VSNIMIC------NLAYSGATRTDQDSRTALHWACSAGHTIVEVVNDKDDAGWSPLHIAASAGRDEIVKALLAHVNAVNQNGCTPLHYAASKNRHIALANPDAKDHYDATAMHRAAAKGNLKMVLLASTNIQDTEG-NTPLHLACDEERVEEAKFLVTQG--AS-IY--I------------------EN--------------------------KE-----KTPLQVAKLGLILKRLA------------- | |||||||||||||
2 | 6h02A | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | ----------RPTARINSICG-RC----SLLP---CNSWKFQALLRYVQYSRDVCNMLG----QPGSSEVQTRAVD-HDRPVTY-LYNTLYLLKKLVHAIIGS------GWCLSDTLKCA-----------VPDDTYYCRLIRLVMAGFPAHALHVTCVELMASGVLEPYWIVLHDRIVSVISSSLTSE-WYPFRLFDFACHYEMSCSYTLALAHAVWHHSSIGQL--------------------------- | |||||||||||||
3 | 6fesA | 0.12 | 0.12 | 0.96 | 0.49 | CEthreader | -----------GSDLGKKLLEAARAGQDDEVRILLANGADVNTADETGFTPLHLAAWEGHLGIVEVLLKNGADVNANDERHTPLHLAAYTGHLEIVEVLLKNGAGVNATDVIGTAPLHLAAMWGHEADARAQDKFGKTPEDLARDNGYESVARLARKEIIRAVVDELKELIQNVNDDIKEVEKNPEDMEYWNKIYRLVHTMKEITETMGFSPVALVLEAIMMLVKLMLNSSDLIDAVKKMLDMVTRLLDLMVD | |||||||||||||
4 | 5iwkA | 0.07 | 0.07 | 0.98 | 0.58 | EigenThreader | GCEVHQKGAMGETALHIAALYDNNEAAQVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY-----RPHNLIYYGEHPLSFAACVGSGADIRAQDSLGNTVLHILILQPLLLSYLELVPNNQGLTPFKLAGVEGNEARQILDQAIYVLYIICFTMCCVYVTYAFMVLVTMVMRLTNSDGEVVPMSFALVLGWCNVMKMIFGDLMRFCWQMAVVILGFASAFYIIFQTE | |||||||||||||
5 | 3sk9A | 0.27 | 0.10 | 0.36 | 0.33 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------AALALWAKSGN-----------------PFHPLLAHMLDTAAVALAVLRMPRTRALYEDWGLPE---EGALAWAAALVGLHDLHGVFTELFLRRL-LKE-KGLANDLAAALGA--- | |||||||||||||
6 | 6nt5A | 0.20 | 0.09 | 0.45 | 0.45 | MRFsearch | ---SLHPSIPCP-----------------------------------------------------------------------------------------------------------------------RGHGAQKAALVL----------------LSACLVTLWGLRYLVLHLASLQLGLLLNGVCSLAEELRHIHSRYRYWRTVRACLGCPLRRGALLLLSIYFYFTWMLALLGLSQALNILLGLK-- | |||||||||||||
7 | 1aigM1 | 0.23 | 0.13 | 0.56 | 0.57 | FFAS-3D | ----------------------------------------------------------------------------------------------------FSQVQVRGPADLGMTEDVNLANRSGVGPFST------LLGWF-----GNAQLGPIYLGSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAGLWLIASFFMFVAVW-SWWGRTYLRAQALHTAWAFLSAIWLWMVLGFIRP | |||||||||||||
8 | 6xe6A | 0.12 | 0.12 | 0.98 | 0.73 | SPARKS-K | VCINPKMKLPSLELSEFQVFRSSHELHWGVSPEDNGNPLNPKSKGKLTLDSSFNIASPASQAWILHFCQKLRNQTFFYQTDEQDFTSCFIETFKQWMENSHWSFPYKQEIFELCIMEYHLDSKTPGPRFDINDTIRAVVLEFQSTYLFTLAYLSSAPEGLSNGWFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLTWNI----IISLYAIISIAGTIFVTVGSLVLWELNVLESVTISVAVGLSVDFAVH | |||||||||||||
9 | 7a23M | 0.20 | 0.08 | 0.42 | 0.60 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------FGTYGFLRF----------SIPMFPEATLCFTPFIYLSAIAIIYTSLTTLRQIDLKKIIAYSS-VAHMNLVTIGMFSP--NIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLV | |||||||||||||
10 | 6e9eA | 0.08 | 0.06 | 0.76 | 0.83 | DEthreader | ------------------------AGVK--SV-FA-VGTVYIVDTSHV---------LRPEQSVPTDKPLNHIQLIYNILDIEKILAYSNAIYAL----------------FEDFDAFEKFI--GNYRLAFADAFYVLVVYNRPVNYETFISYADS-VSEFTKLIYLLTRFLSGKEKIDSNRFK--QIRYYEACCP---KLDMIAIILYLTVMYIMLKNLVNVNARYVIAHCVEKTVNEFRNTQHLENRFADK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |