Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SDDEGPKSSKTKDGASASRSDVASQQGTKRAAGGMPLPKPDELFRSVSKPTFLYNPLNKQIDWESRIVKAPEEPPKEFKVWKTNAVPPPESYATEEKKKGPPPGMDMAIK |
1 | 2k2bA | 0.05 | 0.04 | 0.72 | 0.58 | DisCoVER | | -MSWMQNLKNYQHLRDPSEYMSQVYGDPLAYLQ-FGYGECFNSTE----SEVQ-CELITGEFDPKLLFCYKTSAH--GI-------PMI--------------GEAPLE- |
2 | 6ar6A | 0.03 | 0.03 | 0.87 | 0.83 | DEthreader | | HLPTLSPIIATI----IDGVSLGAAIKELSETSDPRQ-EIMAVN-----TATTAIITSSLGATFNAIILLLQKNI--PYSF-VDSGKENSELPDVVLINLKD-VKVITIT |
3 | 2fkjA | 0.06 | 0.06 | 1.00 | 0.56 | CEthreader | | TRADKSSTEEKFNEKGELSEKKITRADKSSTEEKFNEKGELSEKKITSSTEEKFNEKGELSEKKSSTEEKFNEKGEVSEKIITRARLEYTGIKSDGSGKAKEVLKGYVLE |
4 | 7cgpA | 0.07 | 0.06 | 0.97 | 0.52 | EigenThreader | | LQYSLLLQYLVGDKRQSEEQKMIEKAMESCAFKAALAC---VGGFVLGGARGMSYAKNFAIVGAMFSCTECLIEWKNSVISGCITGGAIGFRAGLKAGAIGCGGFAAFSA |
5 | 2inpE | 0.18 | 0.07 | 0.41 | 0.29 | HHpred | | -----------------------------CAPFALLVQPFSALVDEILKPATAAHPDSAKADFLNAEWLLNDEP------------------------------------ |
6 | 2pffB | 0.20 | 0.08 | 0.41 | 1.20 | MRFsearch | | --KQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGMDLYKTSKAAQDV--------------------------------------------------------------- |
7 | 6em3A | 0.14 | 0.13 | 0.94 | 0.32 | FFAS-3D | | ------SSRGVNYRHRHLIQDLSGLPHSRKEPKLDTLQQLNEIAELYNCNNVLFFEARKHQDLYLWLSKPPNGPTIKFYIQGSRPVLSFHNFGVPPNARKSKPFIDHVM- |
8 | 3hgfC | 0.11 | 0.09 | 0.79 | 1.00 | SPARKS-K | | --KKIENIVTKIDKKKYIYKKLLNEI-AEIEKDKTSLEEVKNINMSYGK-SLNKLFLEKIKKKSENMIKSME----KYIKDLDEI--KEQSPKAEMN------------- |
9 | 6j5jd | 0.23 | 0.05 | 0.24 | 0.42 | CNFpred | | ---------------------------------------------------------LKAIDWVAFGEIIPRNQKAIANSLKS--------------------------- |
10 | 5xauA | 0.05 | 0.05 | 0.90 | 0.83 | DEthreader | | SVLEKTLPQAK----SILE-VHNASLALSASIGRELQAGAASKVLPTEE-LDGTGFVPGGSVRGCVKLKRL-----NTTGVSGCLLVGRAMTFFLLYVSQSLQLLRTHRG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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