>PF15558 (370 residues) VMSSRDQKIVALVLARLEKAQRMRELQQQAAEAWEELKRSDQQVQMTLERERRLLLLQSQ EQWLQERGQRKTRLRREQRGRRRDSQVRDTGQEESWWRAQLEDQENQRQDRLERACAQAE HRKQCQRRRLREQERTLRSLREQRSRQLQRKLEEACHKRHLHAMECQKKVQETNLSSLVN YQARKVLMDCQAKAEELLRKLSLEQRYQRFQEIHQGLVKERHRELRDKAQKEEEQLQQVK WRAGESEEQRKAHKRILVELADQKIRQARSHVHKTARDKAQHLRELSVLREKNHHILKLK AEKEEKCHIQGIKEAIKRKEQRMRQISQGKDPALEEFQKVPRASRRDPRALPNGSFDQGA LEAQLRARQQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VMSSRDQKIVALVLARLEKAQRMRELQQQAAEAWEELKRSDQQVQMTLERERRLLLLQSQEQWLQERGQRKTRLRREQRGRRRDSQVRDTGQEESWWRAQLEDQENQRQDRLERACAQAEHRKQCQRRRLREQERTLRSLREQRSRQLQRKLEEACHKRHLHAMECQKKVQETNLSSLVNYQARKVLMDCQAKAEELLRKLSLEQRYQRFQEIHQGLVKERHRELRDKAQKEEEQLQQVKWRAGESEEQRKAHKRILVELADQKIRQARSHVHKTARDKAQHLRELSVLREKNHHILKLKAEKEEKCHIQGIKEAIKRKEQRMRQISQGKDPALEEFQKVPRASRRDPRALPNGSFDQGALEAQLRARQQ | |||||||||||||||||||
1 | 2tmaA | 0.10 | 0.07 | 0.73 | 1.87 | FFAS-3D | ----------------------------------DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKTDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELS-EGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVL-SDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEE---------------------------------------------------------------- | |||||||||||||
2 | 6yvuB | 0.09 | 0.09 | 1.00 | 1.83 | SPARKS-K | LMKLKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQEKGLESEIKDAETSCLSEDELRELDVELIESKINELSYYVEETVLEEYARRLAEFKRRKLDLNNAVQKRDEVKEQLGILKKKRFMAGFNIISMTLKEMYQMI | |||||||||||||
3 | 3dxjP | 0.10 | 0.04 | 0.41 | 0.87 | DisCoVER | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRQYLHEIGQVPLLLEEEVELARKVE-EGMEAI-KKLSEITGLIREVVRAV--RH-----------IPGLKET-LDPKTVEEIDQKLKSEHKRYLHIA--RE--GEAARQHL--IE--AN-LRLVVSIAKK-------------YTGRGLSFLDLIQEGNQGLIRAVFEYKRRFKFYATWWIRQAINRAIA- | |||||||||||||
4 | 3ayfA | 0.06 | 0.04 | 0.57 | 0.67 | DEthreader | ------------MDYGTVLGHGSDTA--L----VIKEMRTAQVYGLEKVR----------------------------------------------------------------------------GLIKESDMP-RA-------------------------------------SVTILILIGIILYVFYRYQLSMQ----------T-SQVKAGKYFVVVSALFFVQTMFGALLA-YY-T-EPDSFIYDILPIAYH-QLWALVVLVILGMLWLAIAVEGIFEVVLQFTILLGSGIGAVSANLPAVSFEHGQFLT------------GLAGMVVITLLPGILQMKEAFIHGWASRSSFLQQVQNLVRAV | |||||||||||||
5 | 1f5nA | 0.08 | 0.08 | 0.99 | 0.72 | CEthreader | EADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTYVNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKSLQELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM--- | |||||||||||||
6 | 7bylA | 0.05 | 0.03 | 0.69 | 0.80 | EigenThreader | ---------------------------------------------SAAHKRYRRLQNWVYNVLERWAFVYHVFIFLLVFSCLVLSVLSELANECLLILEFVMIVVFGLEYIVRVWSAGCC---------------CWQGRFRFAFCVIDFIVFVASVAVIAAGTATSALRSMRFLQILRMVR------------MTWKLLGSVVYAHSKELITAWYIGFLVLIFA-------------SFLVYLAEKADSLWWGTITLTVLAAGFALLGISFFALPAGILGSGFALKVQEQHRQKHFE------------------------------KRRMPAANLIQAAWRLYSTDMSRAYRILKFLVAKRKFKETLR | |||||||||||||
7 | 4f61I | 0.14 | 0.07 | 0.51 | 0.22 | HHpred | ------------------------------------------------------------------------DPSLEEIQKLEAAEERRKYQEAELLKHLAEK-----REHER-------------E-VIQRAIEENNNWIKMAKEKLAQKMESNKENREAHFAAMLERLQEKDKHAE----EVRQRAIEENNNWIKMAKEKLAQKMESNKENRKYQEAE----LLKHLAEKREHEREVIEENN---N----WIKMAKEKLAQKMESNKENREAHFAAMLERLQEKDKHAEEVRK--------------------------------------------------------------------------- | |||||||||||||
8 | 1f5nA | 0.11 | 0.09 | 0.87 | 0.68 | MRFsearch | ---VHRRKLAQLE--KLQDEELDPEFVQQVADFCSYIFRLESLVLTYVNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTESLQELLDLHRDSEREAIEVFIRSSDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPGIQAEEILQTYLKSKESMTDAILQTDQTLTE----KEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM---------------------------------------- | |||||||||||||
9 | 6z47G | 0.12 | 0.09 | 0.69 | 1.50 | FFAS-3D | -----------------------------------QREIESLTQQFEEKAASYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKRRQLLKQLHEHETELEDERKQRALAAAAKKKL-EVDVKDLESQVDSVNKAREEAIKQLRKLQAQ------------------------------------------------------------------------------ | |||||||||||||
10 | 6xnsA | 0.09 | 0.07 | 0.84 | 1.40 | SPARKS-K | ----------------------------------------DRSDHAKKLKTFLENLRRHLDRLDKHIKQLRDILSENPEDERVKDVIDLSERSVRIVKTVIKIFEDSVRKLLKQINKEAEELAKSPEDLKRAVELAEAVVRANLSKKALEIILRAAAELAKDALAAAARAASKVQQEQSNLAKAAQEIMRQASRAAEEAARRAKETLEKAEKDGDPETALKAVETVVKVARALNQIATMAGSEEAQERAARVASEAARLAERVLELAEKPEVARRARELQEKVLDILLDILEQILQTATKIIDDANKLLEKLRRSEPKVVETYVELLKRHERLVKQLLEIAKAHAEAVEGGS------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |