Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | TSVVPQTRPNAANSAANEVALASNTQTKAQRTRGAGQSIKAWTEIRLTDERSGINPLTGRNLGGDGTYVINPQISATLGQNLADISDPTVFMGEQSLGGHVKLMVENPQTVRERSDGGFQQIRFSARYHLKNSDSWQTPNMSLNMRAANTRALRGSVNADAPLKIAGVGVQGGAEIGGDNTTETSVEAAVDEFRLGGSTTYFDHWHDVEMVLNSSGYAVATVRDSNGRGQTNRPVFAQRVAAAERYDTQRGSKVTEHNASVPARVQMPLLR |
1 | 4bq2A1 | 0.06 | 0.04 | 0.58 | 0.64 | DisCoVER | | ------------------SHML------FD---FENDQVPSNIHFLNAR----ASIETYTGIN--GEPSKG-------------L--K-LAMQS--KQH-------------------SYTGLAIVPQPWDWS-EFTSASLYFDIVSVSTQFYLDVTDAVFTRSIDIPMQSYYAKLSGHDLESDDRQFVWMWGVKNL---DLSGIAKISLSVQSAMHDKT---------------VI--I-----D-------N----------IRIQP-- |
2 | 2vzvA | 0.08 | 0.06 | 0.68 | 0.67 | DEthreader | | FYRWNETAAADKLKYVLNLLNTVM-MNVYWYDK----G-SAGVDIPLMMSASELDTMWKNPQYHRSFLFGLRYGS-NLNDFVR-K----A-QL-------SQYENV----YWMNSPWDAYMDQNGA-Y------------GAKKANEP-L-------------------HIQ-YSHDNRSVATTKL---------KATAVAKVWPFYVDSKVPVLPVEWDNAVSLWP-GETTTLTAVRISGW--------------NT-GTQ-TVP-A--- |
3 | 3efmA | 0.08 | 0.08 | 0.98 | 0.70 | CEthreader | | VSPILSQWNYGSTDMDAAIYDHVEIVRGATGLMTGSGNPSAAVNFVRKRPLREFAATFNASVGSWDYVRGDADISVPITEDGRIRSRLVAAYSQGDLDTRRRTFYGVVSADLT------PDTVLTTSVEYQHNHSNGPWARQDTEATTYFVDLTHRFTNDWKLRAAYSHTDGRYLMKHFSNYDGNLDRDDIHFSLSAPFEAFGLRHEVALGWMSIDHSDIQRYAMTLSPADDVRTKQTGAYLVGRFALAEPLHLIVGDRWSDWKTKQMYFG |
4 | 4cdbA | 0.08 | 0.07 | 0.86 | 0.63 | EigenThreader | | LPGMTNQDNVNNAVNTLVERWNEKYAQ-----AYPNVSAKIDYDDEMAYSESQLIAKFGTVNGKMQEEVISFKQIYYN-----------VNVNEPTRGKA-------VTLQALGVNAENPPAYISSVAYGRQ--------VYLKLSTNAFDAAVSGKSVSGDNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFGVPIAYTTNFLKDNEKINIDHSGGYV----AQFNISWDEVNYDPEGNEIVQHKNWSENNK--SKLAHF |
5 | 6fhwA | 0.16 | 0.08 | 0.50 | 0.36 | HHpred | | -----------------------NRDTG-TPLSAIDLTWSYAAFITMSQRRAGQYPWGSRNASTPGIYTPATAAGAPNVTS-SCQVSITFNINATTYGE-LYVIGNSSDLGAWNIADAYAGEVISYQYVRQEDDIYETVNRTLTVPACGGATWMGPVGSSGN------------------------------------------------------------------------------------------------------------- |
6 | 1k1yA2 | 0.11 | 0.03 | 0.30 | 0.45 | MRFsearch | | --------------------------------------------------------------------------------------------------ARVEKKIEL------------TEDGFIAKYRVLLEK-----PYKALFGVEINLAVHSVMEKPEEFEAKEFEVNDP-----------------------------YGIGKVRIELDKAAKVWKFPIKT---------------------------------------------- |
7 | 2bk1A | 0.14 | 0.13 | 0.92 | 0.33 | FFAS-3D | | ---VDDPTYGKVSGAIDELVSKWNEKYSSTNAKVLENSLGVDFNAVANNEKKVMLPKNPSDLFDDSV------TFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLE--------TTSSSKDVQAAFKALIKNTDIYENSSFTAVVLGGDAQEHNKVVTKDYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSHSGAYVAQFEVAWD-EVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVI---PLEANARNIRIKARECTGLAEYDVPLTN |
8 | 3kogA | 0.11 | 0.08 | 0.75 | 0.59 | SPARKS-K | | ----------------------------------TPVNAKFIITPVVIDATTGTDVAEISFSKGNGTYEGTPELASE---------SININAKYK---GTGSASVTIPALKA----GQFGAKEVTIILAQEESSNSQIETTKHSGFKNNT----SDYWYYITVTYTKKEGSEVIKNDYE-GDDSEIKNIIDAYNVTLNDVQVLAHSRFSVFVDYKTTSVYQIIEKSPDGNPVDSYNTIVSPKNEQIPGHGHAPSHGHGH------------ |
9 | 3ljyA | 0.10 | 0.06 | 0.53 | 1.13 | CNFpred | | -----------------------------------------IVKTNSK-------WLAAAKVSGNANFMVNSPLTGDE-TVIKANANSLVQLKETVTVGKLDLNVSG--ANMVVN----HLEADKIECDIDG-------SGSITIKKGNAKEGDYSIVSSGDIHAFGLAVP-------------QLSCKVTG----NGLAEVHATDNLKANVVGKGNIRYKG------------------------------------------------- |
10 | 2futA | 0.08 | 0.07 | 0.79 | 0.83 | DEthreader | | ---------PDLNRDPKLALNYEFLKDP-K-DWGPESVIAEFQHNSLLI----YDPKETFS----GGQRTGKILAQGFGPDYTYLKGDITAA-YS---K---VKRSFL-FLNLKD-A-KVPAA-IVFDKVVASN-PDFK-KFWLLHSEPEIQALLPDAA--NSNITSIG----------EALERGEWRVEITPKKAA-A--E-DYYLNVIQIADNTQQLHEVKRIDGVGVQ---LADRIVTFSKTSET--VDRDLLWVALYFEGTEG---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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