Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NWKFNPVKDVDMRGGASYRSALDEAFRRTGVPKEQFTVTKWGKTIDGKSIPVEYTGPGGANVNMDIPSLDNVKSNGGLGEGPHQPHIGYQTPGKGSSRTRGHIFVDNVPATR |
1 | 5t86A | 0.08 | 0.06 | 0.79 | 1.06 | DisCoVER | | -QIL-----KPEK---NWETARNKALDLVNL-GADSKPVIGRLEVSAGGKVIGRQSSDKVGWRVDYDP-------------EKGTHINIWDYSQGKKAVKQVIPFNEFEIL- |
2 | 6bywB | 0.10 | 0.09 | 0.89 | 0.83 | DEthreader | | YPGTPPWAH-VQYLVKK--Q--AQ-NF--YI--TWRVEVANKKSNWFDDICDGRVTAQSAWVATTPPDYAPQIERRMVNYGPGVEL-MRLKQDLQSWRSTDLTMGWQSVWK- |
3 | 5t86A | 0.11 | 0.09 | 0.80 | 0.89 | CEthreader | | ---------QILKPEKNWETARNKALDLVGNLGADSKPVIGRLEVAGNGKVIGRQSSGKVGWRVDY-------------DPEKGTHINIWDYSQGGKAVKQVIPFNEKSFET |
4 | 5t86A | 0.10 | 0.08 | 0.80 | 0.68 | EigenThreader | | ------QILKPEKN---WETARNKALDLVGNLGADSKPVIGRLEVSAGNKVIGRQSSGKVGWRVDYDP-------------EKGTHINIWDYSQGKKAVKQVIPFEGNEKSF |
5 | 5t86A | 0.15 | 0.12 | 0.76 | 0.27 | HHpred | | ----------ILKPEKNWETARNKALDLVGNGADSKVIGRLEVS-AGNGKVIGRQSSDGKRVDYDPE------------K---GTHINIWDQGKGPKAVKQVIPFEGNEKS- |
6 | 2mlbA | 0.31 | 0.12 | 0.40 | 0.40 | MRFsearch | | ----------------TVKELAEEIARRLGLSPEDIKLTHNGKTLPGSTITLEIKKKGGLE--------------------------------------------------- |
7 | 3hwuA | 0.13 | 0.12 | 0.93 | 0.39 | FFAS-3D | | ELKGKYKTPLVLRHGDNVLQNLEQLARDEHIPSASFVGIG------FSEATFGFYDFGRKQFDPK-TYRNVEANTGSIAWKEGKPHAHGTVTDGTFQGAGGHLLGLTVGTG- |
8 | 5t86A | 0.12 | 0.10 | 0.80 | 0.72 | SPARKS-K | | ---------QILKPEKNWETARNKALDLVGLGADSKPVIGRLEVSAGNGKVIGRQSSDGVGWRVDYDPEKG-------------THINIWDYSQGKGAVKQVIPFEGNEKSF |
9 | 4mjgA | 0.11 | 0.05 | 0.50 | 0.56 | CNFpred | | -------------------ERLEKLVTEN--KPDWAVAVQVDKQIDRATRGIQLIDNYGGLVEFKFS---------------DSIAVRSRSA-------------------- |
10 | 2zzgA1 | 0.09 | 0.07 | 0.84 | 0.83 | DEthreader | | IYEMRISMAHHAFPIYWMDETVELAFEFFLMKPEDITFKENPWA---AGPAFEVLYRGLEVATLVFMQYKKAPEQDQIPMETKVVDTGYGRLWAAVL--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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