>PF15539 (291 residues) AKEWDEFLAKGKRFRVLQPVKIGCVWAADRDCAGDDLKVLQQFAACFLETVPVQEEQTPK ASKASKRENRDQQILAQLLPLLHGNVNGSKVIIREFQEHCRRGLLSKHTGSPPSPSTTCL HTTSEDAAIPSKSRLKRLISENSVYEKRPDFRMCWYVHPQVLQSFQQEHLPVPCQWSYVT SVPSAPREDSGSVPSTGPSQGTPISLKRKSAGSMCITQFMKKRRHDGQVGAEDMDGFQAD TEEEEEEEGECMIVDVPDAAEVQAPCGATSGAGGGVGVDTSKAALPASPLG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | AKEWDEFLAKGKRFRVLQPVKIGCVWAADRDCAGDDLKVLQQFAACFLETVPVQEEQTPKASKASKRENRDQQILAQLLPLLHGNVNGSKVIIREFQEHCRRGLLSKHTGSPPSPSTTCLHTTSEDAAIPSKSRLKRLISENSVYEKRPDFRMCWYVHPQVLQSFQQEHLPVPCQWSYVTSVPSAPREDSGSVPSTGPSQGTPISLKRKSAGSMCITQFMKKRRHDGQVGAEDMDGFQADTEEEEEEEGECMIVDVPDAAEVQAPCGATSGAGGGVGVDTSKAALPASPLG | |||||||||||||||||||
1 | 4wzzA | 0.07 | 0.04 | 0.68 | 0.75 | DisCoVER | ---------------YATTATYAIIVKSAGNY----NQKESEGYKVINGKCVIQEPKSA--TAEDQITCINNAIS-QGVDCIAIAAN--------------------DTDA----------------LEALTEAKN-QG--IH-------VLSLDSAT--NANSR---K-VFVNQAGTACAPTTVGIAAAKLTGLGLPSEADYIGCPYFLWNPILGNLAAYASISLVNGTITGAASFTVPDKTLGDNGSYTEIILGA--------PF-------KFEPS---NIAEWAKV- | |||||||||||||
2 | 6msoA | 0.06 | 0.04 | 0.66 | 0.67 | DEthreader | -----------------------DFVAQLLKNASPGCDTGKGGGSNKSFLLQETKSVLN-----P--KSLRNFLKEKLAMFGTSACP---PY-H-VA--VV-IGGTSAEMTMKVLKYSCHYDDLTFRDLELEEEVLKVCQN-IGMGAQ---FGGKYY-----------------V-CS---------P-LKEELLPALSLTGTIIPVYYAGPFGPTTAGRMDPFVDL----GS--MLARVTCGGFY--LGSIG-----------AAVLAQNIVIEVENFP----------- | |||||||||||||
3 | 4m8rA | 0.06 | 0.06 | 1.00 | 0.52 | CEthreader | LGPVGAEIVERHSNGSIRPYRKPESRVEIFLNRASERSLGKVLLADGQTPKDFRLYGINETDKTIERAYAEETVTGKKTWDSAHPDFRSVVNLQKTYGLCGLAEENGVQQPFFLDFCTGEWKALSFYDYNTLALVIGSGNDIAAIQQRGKGYSLYNVSAGLEQSNYATKTRSNFPPEPQFELPEGFTPEQFGDYPGVFQGNEIILLSARKGNGVPLYNYRNGFYVLEGIEADAIIPFYFGALPDSLLYQKKVGYIYYSSGDNRGSSFRLLEPDKESSKLQLQEPFAQLSDK | |||||||||||||
4 | 6kbhA | 0.09 | 0.09 | 0.93 | 0.63 | EigenThreader | APEQQVAVADAVGKFWQFAP--------DGHGWMPFGIRVQQEQ-----------PDVVTMAGIVAAHETTANASANALRLLLEHCADPSLIPNAVEECLRHSGSVISLDDFDIRRDNASCMGKNLARMEIQIFLEELTRRLPHMELVPDQHVWVRWDNPERADPELLSRRQPVKIGQVAVLHDRESRGHFKLDPDAKTPVIAMADQVKAAGGDYEIHYAGRSRTSMAFLDRLARDHGLSEATAHWPDDTLHVEHFSSVPVAADQTVLQALRAANIDAQSDCEEGICGACE | |||||||||||||
5 | 5ejoA | 0.13 | 0.03 | 0.26 | 0.80 | HHpred | ------------------------------------------------------------------AMITDPMDLLRLFDGVQDSTFSLGTVTEIAQK----NLP-----------------------QYNKQTIKNTIKEYAIRSSGKGDPRKWVIKDAQNWENLRAN-------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5ejoA | 0.14 | 0.03 | 0.24 | 0.63 | MRFsearch | ---------------------------------------------------------------------TDPMDLLRLFDGVQDSTFSLGTVTEIAQKNLP---------------------------QYNKQTIKNTIKEYAIRSSGGDLPRKWVIKDAQNWENL----------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5uowB1 | 0.11 | 0.10 | 0.91 | 0.48 | FFAS-3D | ITHVCDLMSGTK-----IHGVVFGDDTDQEAIAQILDFVSSQTFIPILGMIMADKDEMSTFFQFGASIKQQATVMLNIMEVITSNFPGYRDFISFIKTTVD-------NSFVGWEVQNYITLDTSYTDAQTLTQLKKYIFEEARSLGLMGYGFVWIVPSLVTGNTDIIPYEFPSGLVSVSYDDWDYGIEEKHSVIPEAKTSCYGQNERNDPPLHTLHNFMINVTWDGKDLSFTEDGYQANPKLV--------VLLLNMEREWEK-----VGKWEAKSLNMKYPVWPRIDSD | |||||||||||||
8 | 4n40A | 0.10 | 0.09 | 0.86 | 0.65 | SPARKS-K | ---------------EPQIETRVILVQEAGKQ-EELIKALKDI------KVGFVKESVEEFEGLDSPEDFQDSVFNDLYKAIG---------PPVVLNCSQKGEPLPFSCRPLYCTSNLVLCFTGFRKKEELVRLVTLVHHGGVIRKFNSKVTHLVANCEKFRVAVSLGTPIKPEWIYKAWERRNEQDFYAAVDDFRNEFKVPPFQD--------CILSFLGFSDEEKTNEETEQG--GKYLPLGDERCTHLVVEENIVKDLPFEPSKKLYVVKQEWFWGSIQDARAGETY | |||||||||||||
9 | 5ejoA | 0.14 | 0.03 | 0.23 | 0.55 | CNFpred | ------------------------------------------------------------------------MDLLRLFDGVQDSTFSLGTVTEIAQKNLP---------------------------QYNKQTIKNTIKEYAIRSSGKDLPRKWVIKDAQNWEN------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 6fijA | 0.03 | 0.02 | 0.71 | 0.67 | DEthreader | EIGSCLADASAPVLTAPYH-V--L-AWPTVRIPSRGAAAMSEAVR----------------------------------------SPIAILA-ASGRFS--A-EFDAAYAPVDPAQRLL-STYPGFGRVNFGPSALVDTA--LKRL------PDAQAD-------------KD-PIQASIVCEMHGTGTQAGDSG-TIGAVNVSLAKLMKHREPE----VALSAKTPMVNLTNMITWIDKHSGDSLATLPLSTTRHHRHPHPNGPSVQA---------ALAKFYASVEWSR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |