Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | AKEWDEFLAKGKRFRVLQPVKIGCVWAADRDCAGDDLKVLQQFAACFLETVPVQEEQTPKASKASKRENRDQQILAQLLPLLHGNVNGSKVIIREFQEHCRRGLLSKHTGSPPSPSTTCLHTTSEDAAIPSKSRLKRLISENSVYEKRPDFRMCWYVHPQVLQSFQQEHLPVPCQWSYVTSVPSAPREDSGSVPSTGPSQGTPISLKRKSAGSMCITQFMKKRRHDGQVGAEDMDGFQADTEEEEEEEGECMIVDVPDAAEVQAPCGATSGAGGGVGVDTSKAALPASPLG |
1 | 4wzzA | 0.07 | 0.04 | 0.68 | 0.75 | DisCoVER | | ---------------YATTATYAIIVKSAGNY----NQKESEGYKVINGKCVIQEPKSA--TAEDQITCINNAIS-QGVDCIAIAAN--------------------DTDA----------------LEALTEAKN-QG--IH-------VLSLDSAT--NANSR---K-VFVNQAGTACAPTTVGIAAAKLTGLGLPSEADYIGCPYFLWNPILGNLAAYASISLVNGTITGAASFTVPDKTLGDNGSYTEIILGA--------PF-------KFEPS---NIAEWAKV- |
2 | 6msoA | 0.06 | 0.04 | 0.66 | 0.67 | DEthreader | | -----------------------DFVAQLLKNASPGCDTGKGGGSNKSFLLQETKSVLN-----P--KSLRNFLKEKLAMFGTSACP---PY-H-VA--VV-IGGTSAEMTMKVLKYSCHYDDLTFRDLELEEEVLKVCQN-IGMGAQ---FGGKYY-----------------V-CS---------P-LKEELLPALSLTGTIIPVYYAGPFGPTTAGRMDPFVDL----GS--MLARVTCGGFY--LGSIG-----------AAVLAQNIVIEVENFP----------- |
3 | 4m8rA | 0.06 | 0.06 | 1.00 | 0.52 | CEthreader | | LGPVGAEIVERHSNGSIRPYRKPESRVEIFLNRASERSLGKVLLADGQTPKDFRLYGINETDKTIERAYAEETVTGKKTWDSAHPDFRSVVNLQKTYGLCGLAEENGVQQPFFLDFCTGEWKALSFYDYNTLALVIGSGNDIAAIQQRGKGYSLYNVSAGLEQSNYATKTRSNFPPEPQFELPEGFTPEQFGDYPGVFQGNEIILLSARKGNGVPLYNYRNGFYVLEGIEADAIIPFYFGALPDSLLYQKKVGYIYYSSGDNRGSSFRLLEPDKESSKLQLQEPFAQLSDK |
4 | 6kbhA | 0.09 | 0.09 | 0.93 | 0.63 | EigenThreader | | APEQQVAVADAVGKFWQFAP--------DGHGWMPFGIRVQQEQ-----------PDVVTMAGIVAAHETTANASANALRLLLEHCADPSLIPNAVEECLRHSGSVISLDDFDIRRDNASCMGKNLARMEIQIFLEELTRRLPHMELVPDQHVWVRWDNPERADPELLSRRQPVKIGQVAVLHDRESRGHFKLDPDAKTPVIAMADQVKAAGGDYEIHYAGRSRTSMAFLDRLARDHGLSEATAHWPDDTLHVEHFSSVPVAADQTVLQALRAANIDAQSDCEEGICGACE |
5 | 5ejoA | 0.13 | 0.03 | 0.26 | 0.80 | HHpred | | ------------------------------------------------------------------AMITDPMDLLRLFDGVQDSTFSLGTVTEIAQK----NLP-----------------------QYNKQTIKNTIKEYAIRSSGKGDPRKWVIKDAQNWENLRAN-------------------------------------------------------------------------------------------------------------------------- |
6 | 5ejoA | 0.14 | 0.03 | 0.24 | 0.63 | MRFsearch | | ---------------------------------------------------------------------TDPMDLLRLFDGVQDSTFSLGTVTEIAQKNLP---------------------------QYNKQTIKNTIKEYAIRSSGGDLPRKWVIKDAQNWENL----------------------------------------------------------------------------------------------------------------------------- |
7 | 5uowB1 | 0.11 | 0.10 | 0.91 | 0.48 | FFAS-3D | | ITHVCDLMSGTK-----IHGVVFGDDTDQEAIAQILDFVSSQTFIPILGMIMADKDEMSTFFQFGASIKQQATVMLNIMEVITSNFPGYRDFISFIKTTVD-------NSFVGWEVQNYITLDTSYTDAQTLTQLKKYIFEEARSLGLMGYGFVWIVPSLVTGNTDIIPYEFPSGLVSVSYDDWDYGIEEKHSVIPEAKTSCYGQNERNDPPLHTLHNFMINVTWDGKDLSFTEDGYQANPKLV--------VLLLNMEREWEK-----VGKWEAKSLNMKYPVWPRIDSD |
8 | 4n40A | 0.10 | 0.09 | 0.86 | 0.65 | SPARKS-K | | ---------------EPQIETRVILVQEAGKQ-EELIKALKDI------KVGFVKESVEEFEGLDSPEDFQDSVFNDLYKAIG---------PPVVLNCSQKGEPLPFSCRPLYCTSNLVLCFTGFRKKEELVRLVTLVHHGGVIRKFNSKVTHLVANCEKFRVAVSLGTPIKPEWIYKAWERRNEQDFYAAVDDFRNEFKVPPFQD--------CILSFLGFSDEEKTNEETEQG--GKYLPLGDERCTHLVVEENIVKDLPFEPSKKLYVVKQEWFWGSIQDARAGETY |
9 | 5ejoA | 0.14 | 0.03 | 0.23 | 0.55 | CNFpred | | ------------------------------------------------------------------------MDLLRLFDGVQDSTFSLGTVTEIAQKNLP---------------------------QYNKQTIKNTIKEYAIRSSGKDLPRKWVIKDAQNWEN------------------------------------------------------------------------------------------------------------------------------ |
10 | 6fijA | 0.03 | 0.02 | 0.71 | 0.67 | DEthreader | | EIGSCLADASAPVLTAPYH-V--L-AWPTVRIPSRGAAAMSEAVR----------------------------------------SPIAILA-ASGRFS--A-EFDAAYAPVDPAQRLL-STYPGFGRVNFGPSALVDTA--LKRL------PDAQAD-------------KD-PIQASIVCEMHGTGTQAGDSG-TIGAVNVSLAKLMKHREPE----VALSAKTPMVNLTNMITWIDKHSGDSLATLPLSTTRHHRHPHPNGPSVQA---------ALAKFYASVEWSR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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