Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | RHQQATQVLRNVFYLLHSQLELYAGKKNQGQYQLHTGNVAKVLSHGGRVNIRIPALGDSKENPHALMEWLGITHEAGELDSHDAVFSRLAGTHHVRIGDNKAGQSGSFKETGGMMAAINAKLHFDHLMGMNLAVGGLGKKDFNGDVILPDGAHGHMFIGFREPTLKRDGVLQIGIETTEPGGFSTVGYIHNWRSSEKTANPVSSVGGLKKDKVGDGSKNARTIDLAKVGEGDWKKRLDEIRSHFEGKLSAAQDEQAQKEVFKEL |
1 | 2pffA1 | 0.10 | 0.09 | 0.89 | 0.75 | DisCoVER | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVTFKDKYVLIGAGKGSIGAEVLGLLQGGAKVVVAKGSTLDLDAIIPFAAIPEQDSKSEFAHRIMLPAQVILPMSHGSESKLSLEQLTVCGAIIGWTRNIIAEGIEMGVRTFSQKEMAFLGLMADLNGGLQFVLKTLRLVETSEVRKAVS---------------------------- |
2 | 7bwmA2 | 0.05 | 0.03 | 0.62 | 0.67 | DEthreader | | ---------------------AGTITMGAPNSLFA-------------IGN-Y------ITRSF--LP--TFSNIGVWGTADNKNQRLFGIPVLVNRSGSDSN------YGEVNG--LLNPA---LVET----------------------------YFGNANTTSPGIGTPGLWTPQ-----APRPDSSQGSTTTRNALPEHP--NALAFQVLDDLKNLQVRLRQFGTHTNNL--A-PN-TNTGN-DVVGV---GRLSE-NAA |
3 | 1vt4I3 | 0.13 | 0.13 | 0.96 | 0.72 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5dseA | 0.06 | 0.06 | 0.95 | 0.67 | EigenThreader | | TQNLRMTIARQLAEILLRGMCPLEDPFCPQENTEEALLLLLISESMAN------RSKFAFEEGKSARAVKVLKECIRLKPDDATIP--LLAAKLCMGSLHW-----LEEAEKFAKTVVEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSALILHQLGRYSLAEKILRDAVQVNLQAQGNDAAATECFLTA |
5 | 2b5uA | 0.16 | 0.12 | 0.75 | 0.29 | HHpred | | -----SAAIADIMAALFKFGLWVLPS---QIAKD-DPNM---M---SKIVTSLPA---------DDITESPVSSL---PLDKATVN------VNVRVVD--------DVKDERQNISVV------SGVPMSCPV------------VDPTERPG-V---FTAS-IPGAPVLNISVNNSTPAVQTLPGVTN-NTDKDVRPAGFT-QGGNTRDAFPKDSHNAVYVSVSDVLPDQVKQRQDEENRRQQEWDATHPVEAAERNYERA- |
6 | 6sh3A | 0.15 | 0.09 | 0.59 | 0.70 | MRFsearch | | --GGGLMILGTGLAVARSGIIKA----------------SRVLYRQMIVDLEIQSK---DKSYAWFLTWMAKHPQ---------RVSRHLSVRTNYIQHDNGSVSTKFSLVPG---------------------------------------PGNHWIRYK------GAFILIKRERSA--------------------KMIDIAN----------GSPFETVTLTTLY--RDKHLFDDILNEAKDIALKTLDSGIKEGILDDV |
7 | 3ksyA1 | 0.14 | 0.07 | 0.47 | 0.38 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------MNEIQKNID------------GWEGKDICCNEFIMEGHERHIFLF--------DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEILKDENSVIFSAKSAEEKNNWMAALISLRSTLERMLDVTMLQEEKEE----- |
8 | 7bwmA2 | 0.15 | 0.13 | 0.88 | 0.59 | SPARKS-K | | NAQRAQLFLRGLLGSIPVLVNRSGSDSNKFQATDQKWSYTDLLPAYGEVNGLL---------NPALVETYFGNTRAGGSGSNTT----SSPGIGFKIPEQNNDSKATLIT-----------------PGLAWTPQDVGNLVVSGTT--VSFQLGGWLVTFTKPRAGYLGLQLTGLDASAPRWAAFRGSWVNRLGRSQGSTTTATRNALPEHKPNSTNSSPHLVKPKKTQSDKLDDDLKNLLNQVRTKLRQSFGTDHSTQPQPQS |
9 | 4lgyA | 0.11 | 0.07 | 0.64 | 0.63 | CNFpred | | ----------NALLLIDLGK------------GHNALGATALAQVYRQLGDKPADVRDV-AQLKGFYDAMQALV------------RKLLAWHDRSD--------------GGLLVTLAEMAF-AGHCGVQVDIAALG-----DHLAALFNEELGGVIQVRAEDR-ADCVHYLGQALA--------GDRFVITAN----------------------QTVFSESRTTLR-VWWAETTWQMQRLRD-------NPQCADQEHEAK |
10 | 5h2dA | 0.07 | 0.05 | 0.66 | 0.67 | DEthreader | | ------LQRVAEDL-EY-------------------ADLLQAYVAIFVSYASTVKRVA---KPF--NP---GETF-EQVSPISAGESFV---------R-----------------------SFDFKHLGLWYLTI--RPDSN-GKEEL---YTYKKPNNQVVIGNPQVDNY-VKIVNHGDYCMIGEVYN-AKGGKE-WI-------SAKKKYDTRFNVWHVNER-PEFPFNLTKFAVTLNAPQPHLLPWLPEYWKQRR----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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