>PF15501 (552 residues) SEYQRNFLWKKSYLSESYNPSVGRRYPWAGLRSDQLGITREPSFISKRRVPYHDAQISKS LEWNGAISENDVVVSPKPEAPEIAESQEAEQKEDVNQERVLALEASRVPKRTRSHSTDSR AEGASDIVENDVDVTANHPPVNENEDLEHSTKLHSENVANGLDRVLRKKAGLTVVPSRDI LRNSEYQRQFVWKTPKETAPVFAANQVFHNKSKFVPQFKGNSIIHETEYRRNFKGLSPVK EPKLRNDLKENGNFEAVSPEKCNKTDDPLKLEAEMESKESNQPKKKLTPWRHQRLGKVNS EYRAKFLSPAQYLYKAGAWTRVKENIPDQASLNAMWYAEVKELREKAEFYRKRVQGTHFS RDHLNQILSDNNCCWDVSSTTSSEGTISSNIRALDLAGDPTSHKTLQKCPPTTLEEKRPV LEEQPQKNTTEKLGVSDAPTTPVRRRLAWDAENPDEGLQKQPREEEEGEEEEEKAEKDKQ VHTGELEKLELHEKSKADKIKEGSDSSSVSSGKGGRLPTPKLRELGGIQRTHHDLTTPAV GGAVLVSPSKVR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SEYQRNFLWKKSYLSESYNPSVGRRYPWAGLRSDQLGITREPSFISKRRVPYHDAQISKSLEWNGAISENDVVVSPKPEAPEIAESQEAEQKEDVNQERVLALEASRVPKRTRSHSTDSRAEGASDIVENDVDVTANHPPVNENEDLEHSTKLHSENVANGLDRVLRKKAGLTVVPSRDILRNSEYQRQFVWKTPKETAPVFAANQVFHNKSKFVPQFKGNSIIHETEYRRNFKGLSPVKEPKLRNDLKENGNFEAVSPEKCNKTDDPLKLEAEMESKESNQPKKKLTPWRHQRLGKVNSEYRAKFLSPAQYLYKAGAWTRVKENIPDQASLNAMWYAEVKELREKAEFYRKRVQGTHFSRDHLNQILSDNNCCWDVSSTTSSEGTISSNIRALDLAGDPTSHKTLQKCPPTTLEEKRPVLEEQPQKNTTEKLGVSDAPTTPVRRRLAWDAENPDEGLQKQPREEEEGEEEEEKAEKDKQVHTGELEKLELHEKSKADKIKEGSDSSSVSSGKGGRLPTPKLRELGGIQRTHHDLTTPAVGGAVLVSPSKVR | |||||||||||||||||||
1 | 5jcss | 0.11 | 0.10 | 0.94 | 1.50 | SPARKS-K | ISTVRINEDHQKDSSNKIYNLNMIGMRI--WNVIELEEEEDLTHILAQKFPILTNLIPKSYKNVKSIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQSAADCFAGAIGEFKALEPGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNS-----TLFAFTNHSLR--LM--EQISVCIQMTEPVLKTTVVQQLAKLAKKLTVINVSQQTLLGGYKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKRRLNTHEKKLLLDKW----ADFNDSVKKFEAQVEGSLVK--------TIRAGEWDEVNLATADESISDL-----LTEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPATDVGKRDLPMGIRSRTEIYVHSPERDITD----LLSIIDKYIGKYSVSDEWVGNDIAELYLEALSDNNTIVDGSNQKPHFSIRTLTRTLLYVTDIIHIYGLRRSLYDGFCMSFLTLLDQKSE | |||||||||||||
2 | 2nbiA | 0.10 | 0.09 | 0.85 | 1.11 | MUSTER | SEIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQC---AEVIEQCPIDEC--------LPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDAC-----------------------------FLPKSDSARPPDCTAVG--RPDCNV--------------------------PFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQP-----------TGPQPSSQPSECADVL--ELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPT-QCRPDNPMFSPSPDGSPPVCSPTMMPSPLPSP | |||||||||||||
3 | 2pffB | 0.04 | 0.03 | 0.87 | 0.67 | DisCoVER | VAI--FGGQGNTDDYFEELLIPISCPIGIQLHYVFTPGELRSYLKGATGHSQGLVTAVAIAET---------DSWESFFVS-----------VRKAITVLFFIGVRCEAYVPSPMLSISKQVEISLVNGAKNLVVSGPPQSLYSNRFLPVA--SPFHSHLLVPASDLINDLVIIRLDFGPGSGLGTIVAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GG-GGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQAAQVWNRADNHFKD------------------------------GFSILDIVKGLLSATQFTQPALT--LMEKAAFEDAGHSLGEYAALASLADVMSIESLVVFGMT- | |||||||||||||
4 | 6rc9A | 0.06 | 0.03 | 0.61 | 0.67 | DEthreader | ---RN------GITSQTTYLQRGLGLPQ----------------------------------TESGST--T----------GAM---------------------FGLKVKNAEADT--SNEKLQGAS-QRGKALKIDLANAPIKRSSVQLKADDFGPDVLQTTFNPRRHPWFDGGAPIALIVPTMGDTTVPRLLELLVAQGQGL---LPI-------------------------MWAWQVNWSADFV-ERFNQKLVAPTQGT-NWSHFSPTL--SRF--STGFNLVGSVLDQV----------------------------TTNYTNLPPNLTPTADWSFTNKNN-AQ-------RAQLFLRGL---I-PVLVNRSGSDKFQD--L---GEVNGLLN--PALVET-FGNTRAGGS---------G-SNTTSSPGIGFTITPGLAWTPQDVRWAAFRG---------LKGVWADQAQSDSQGSQRTKLRQSFGTDHST-QPLKTTTNLAPNTGVGRL---------------------------------- | |||||||||||||
5 | 1yo8A | 0.07 | 0.06 | 0.92 | 0.80 | CEthreader | --------------------------------DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPYKCECQTGYAGDGLICGEDSDLDGWPNLNL----VCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGDACDPDDDNDGVPDDRDNCRLVFNPDQEDLDGDGRGDICKDDFDNDNIPDIDDVCPENNAISETDFRNFQVPLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDRDDDYAGFVFGYQSSS------RFYVVWKQVTQTYWEDQPTRAYGYSGVSLK | |||||||||||||
6 | 5mqfM | 0.07 | 0.06 | 0.92 | 0.92 | EigenThreader | KCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFE---------QLISRRPLL---LNSVLLRQNPHHVHEWHKRVALHQGRPREIINAVQTVDPKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFK---QVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRVYKSLKVWSMLADFQSTKAVYDRILDLRIATPQFLEEHKYFEESFKAYERGISLFKWPDGCPPKYAKTLYLLYAQLEEEWGLAR----------HAMAVYERATRAVEPAQQYDMFNIYIKRAAEIGIYQKAIEVLSDEHAREMCLRFADMECKLGCDPRTTGEVRHGNEDTIKEMLRIRRSVQATYNTQV------------------ | |||||||||||||
7 | 3o0yA2 | 0.15 | 0.04 | 0.26 | 0.34 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------KTLTYHEANQIALNLDQEL-----------PFLRRIA-PYNAYTEGWALYSEQVAYE----LGMYEN--------------------DPFGDGRLQAELHDKRWTREQA--------------ISYM-SEQTG--T----AESDVVAEIERYMAWPGQAGYK-------------------LGMLKILSLREQAKA----RLGDKFDAEFHDVVLLNGAVPMAV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 1r6fA | 0.13 | 0.04 | 0.33 | 0.48 | MRFsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------GHDNQLQNGIKRVKEFLE-------------------------WELRAFMAVMHFSLT------------------------------ADRIDDD--------------------ILKVIVDSMN--------------------------------------------------HHGDARSKLREELAELTAELKIYSV-------IQAEINKHLSSSGTINIHDTTIQVDGSEKKIVSIKDFLGSENKRTGAL-----------------------------------GNLKNSYSYNKDSDKSRPLNDLVSQKTTQLSDITSRFNSAIEALNRFIQKYDSVMQRL---------------------------------------------------- | |||||||||||||
9 | 3cnfB | 0.06 | 0.06 | 0.97 | 0.60 | FFAS-3D | --FTKKDKLRASEADDRIVGPTVNLFKYGDFFDTATGIDLTKGIPLVQDLLLDNRLVIVG---ETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALTQVNWLNRDITNMLQQAGTKYGLGLTETRLDYVRLVKTIVGHALNIDHFAASVLNANVTADDRIKALQAHSMISTQFHGPNQGALRPELAFDHDHIINYPRLEGIIVQINGYVASANVSEKRYFPENLEQNQSAARLVSAVKARASEADISSIHLAIAREVSPHELKKIAESPTEFNRIKGDIQNVSGRNEKWDQALYLSEHFPALFSDRLFTPQGFLRTDD--LAIAANFPRASRNPQTYIPYTNQRGTVTNEFASR----------FRTIVATLANVVNEDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFATHVAVVLYQSGVINGPASTYLRENEMPDYYDVVSRFANANLQMNNNRYHESVLEIADIFDQADFIQTSDAVRQLRALMPTLSTSQSLKMQNAQIRRIGTVLRYDDQIDIEAFRWSRFLDELQLR | |||||||||||||
10 | 5yfpD | 0.07 | 0.07 | 0.94 | 1.28 | SPARKS-K | IMYSKSKTNFTRVTNNDIFKIISIS---------HNGFTSLENYLYNI--VNIDIM-EHSKTINKNLEQFIHDQSLNKQENEGFNRIGFLLKTINNPVAFNIITERAKENIIVKSTESIRSKHPSLLKMATSLKNDNHFGLPVQDILSIILRECFWEIFLKLLYAIQCHRAISNILQPTSSAKPAFKFNKIWG------KLLDEIELLLVRYINDPELISSNKDQAFELKALLKDIFPDPFLLFTQSTSTIVPSVLTQNTISMNKSFLPKIQMTMDYLFTVEVESNNPYALELS-----DENHNIFKTALDFQRLFYNLLNVFNTANTFREKSYCILDLLNHFYNYYLGLFNKIITAWLQNGILMDQEQ---------KILNGDETLFHEESIELFKEIPHFYQAGKGLSKSNLTLDTKAINIDEVSQEPMLDADRLRSSWTFSESMDLNYSNNSLGNLKILLDDKASKKFDETIDGFKTLKFKLITILRFNIRALCIYDFQNTKIWNMDVGSIELDQNIASLISELRRTESKLKQQLPEKEKNSIFIGLDI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |