Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | CVQWKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTNQLSGVKDGDCKKLTSEIFAEIETCLNKVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLEPHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHFEGCLYQITSVIQYQANNHFITWILDADGSWLECDDLKGPCSERHKKFEVPASEIHIVIWE |
1 | 2ibiA | 0.14 | 0.13 | 0.95 | 1.17 | DEthreader | | LAGLRNLGNTCFMNSILQCLSNTRELRDYCRLYMRLHTALVEEFAKLIQTIWTS--SPNDV-VSPSEKGYNQ--QD--AQEFLRFLLDGLHNEVN-RVTLRPKNPELKGQMWRKYLEEDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFDLSLPMRLFTKEDVLDGDAAPTCCRCGRKRCIKKFSIQRFPKILVLHLKRFKLTTFVN--DLFANHAVYNLYAVSNHSGGGHYTAYCRSGTGEWHTFNDSSVTPM-SSS-QVRTS-DAYLLFYE |
2 | 5txkA | 0.13 | 0.12 | 0.94 | 1.17 | DEthreader | | SIGLINLGNTSYVNSILQALFMASDFRHCVLRLTENNSPLMTKLQWLFGFLEHS--QRPAI-SPENFLSSPGTQ-QD-CSEYLKYLLDRLHEEEKTGTRICQLKQSS--S-----S--STSVEKMFGGKIVTRICCLCCLNVSSREEFLSLAPDLVNYFLSPEKLTAENRYYCCSLQD-AEKVVELSQGPCYLILTLRKILDDVSIP-LRLPLRGQAYDLCSVVVHSGSGHYYCYAREAENQWYLFNDTRVSFSSESVSNVTPKDTAYVLFYR |
3 | 2ibiA | 0.17 | 0.16 | 0.97 | 5.01 | HHpred | | LAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLHHGSNAHTALVEEFAKLIQTIWTSSPNDVVSPSAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKNPEHLPQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSEVTLMDCMRLFTKE----DVLDGDAAPTCCRCRGRKCIKKFSIQRFPKILVLHFSESRRTSKLTFVNFPNTHAVYNLYAVSNHSGMGHYTAYCRSPTGEWHTFNDSSVTPMS---SSQVRTSDAYLLFYE |
4 | 6dgfA | 0.16 | 0.15 | 0.93 | 0.81 | DisCoVER | | LAGLRNLGNTCFMNSILQCLSNTRELRDYCLRDLHAHTALVEEF---AKLIQTIWTSSPNDVVSPSEFFVYNQ-QD--AQEFLRFLLDGLHNEV--NRVDHLPDDEKGRQMWRKYEREDSRIGDLFVGQLKSSLTCTDCGYCSEVTLMDCMRLFT--K--EDVLDGDEKPTCCRCGRKRCIKKFSIQRFPKILVLHLKRFSKL--TTFVNFPFAHAVYNLYAVSNHSGGGHYTAYCRSPGGEWHTFNDSSVTPM-SSSQV-RTS-DAYLLFY- |
5 | 2ibiA | 0.16 | 0.15 | 0.97 | 0.43 | MRFsearch | | --GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYHGSNAHTALVEEFAKLIQTIWTSSPNDVVSPSAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKNPENLDHLWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVTLMDCMRLFTK----EDVLDGDAAPTCCRCRRKRCIKKFSIQRFPKILVLHLKRFRTSKLTTFVNFPLTHAVYNLYAVSNHSGGGHYTAYCRSPTGEWHTFNDSSVTPM---SSSQVRTSDAYLLFYE |
6 | 6dgfA | 0.15 | 0.14 | 0.96 | 2.82 | SPARKS-K | | LAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRDNAHTALVEEFAKLIQTIWTS----SPNDVVSPSAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVDHLPD-DEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVTLMDCMRLFTKE----DVLDGDEKPTCCRCRGRKCIKKFSIQRFPKILVLHLKRIRTSKLTTFVNFPTNHAVYNLYAVSNHSGTGHYTAYCRSPGTGWHTFNDSSVTPMS---SSQVRTSDAYLLFYE |
7 | 5cvmA | 0.16 | 0.15 | 0.92 | 1.26 | MAPalign | | -FGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKKKKENLLTCLADLFHSIATQKKKVGVIPPKRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEK-----------------KQELTWVHEIFQGTLTNETRCLNCETVSSKDITHCLRDFS----NTETLCSEQKYYCETCSKQEAQKRMRVKKLPMILALHLRFTKLSYRVVFPELRLLDRMYDLVAVVVHCGRGHYITIVKS-HGFWLLFDDDIVEKIDAIEEFYGNSESGYILFYQ |
8 | 5txkA | 0.13 | 0.12 | 0.97 | 0.80 | CEthreader | | KIGLINLGNTSYVNSILQALFMASDFRHCVLRLTENNSPLMTKLQWLFGFLEHSQRPAISPENFLSASWTFSPGTQQDCSEYLKYLLDRLHEEEKTGTR--------ICQKLKQSSSSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTVLDLVNYFLSPEKLTAENRYYCESCSLQDAEKVVELSQGPCYLILTLSFDLRTMRRRKILAGGRGQAYDLCSVVVHSGVGHYYCYAREGENQWYLFNDTRVSFSSFESVSNVPKDTAYVLFYR |
9 | 3i3tC | 0.16 | 0.15 | 0.97 | 1.93 | MUSTER | | HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEV--QELTEAFADVIGALWHPDSCEAVNPTVPSFSGYSQQDAQEFLKLLMERLHLEIN---RRLSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFGKVSLRDCFNLFTKEEELESENAPVCDRCRQKRSTKKLTVQRFPRILVLHLNRFSASRGSVGVDFPLQRPVYQLYALCNHSGSGHYTALCRCQTG-WHVYNDSRVSPVSENQ---VASSEGYVLFYQ |
10 | 5jtvA | 0.15 | 0.14 | 0.89 | 2.20 | HHsearch | | YVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTSSKSVPLALQRVFYELQHS------DKPVGTKLTTLDSFMQHDVQELCRVLLDNVENKMKGT-------------------CVEGTIPKLFRGKMVSYIQCKEVDYRSKKNIFESFVDYVAV----EQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQFMYDPQTDINDRFEFPKDPANYILHAVLVHSGHGHYVVYLNPKDGKWCKFDDDVVSRCTKEEAIERHCTNAYMLVYI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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