>PF15479 (576 residues) ERQVRDRGVTRSKAEKVRPPTVPVPQVDIVPGRLNEAEWMALTALEEGEDVVGDILADLL ARVMDSAFKVYLTQQCIPFTISQAREAMLQITEWRFLARDEGESAVAEDPTWGEDEEPSA CTTDSWAQGSVPVLHAPTSEGLENFQGEDPGGVDQIPLGRSWMGRGSQEQMESWEPSPEL KVTSAPPATSELFQEAGPGGPVEETDGQSRGLSSAGSLSASFQLSVEEAPAEDADPSLEP YLVASSQALTERGQPLDFHLSLEDLYCCMPQLDAAGDRLELRSEGVPRIASGVSESCPSV GDATGPSESSQQQRAGSSDVRLSAQHHRMRRKAAVKRLDPAQLPCHWVCPVAEVLVPDSQ TRPLEAYRGRQRGEKTKARAELQALGPSTRVSPAVFFPLRPGVPFRALDSGPALQFPTLN LGLSSPSFRSKLSLPDSRIRFLTAHPVLPDVARSLSPKLWPSARWPSGWEGEAELLGELW TGRTRVPPQGLELADREGQDPGRWPRTTPPVLEATSQVMWKPLLLPEALKLAPGVSMWNR STQMLFSSGVPEQEDKEGSTFPPVEQHPIQTGAPKP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ERQVRDRGVTRSKAEKVRPPTVPVPQVDIVPGRLNEAEWMALTALEEGEDVVGDILADLLARVMDSAFKVYLTQQCIPFTISQAREAMLQITEWRFLARDEGESAVAEDPTWGEDEEPSACTTDSWAQGSVPVLHAPTSEGLENFQGEDPGGVDQIPLGRSWMGRGSQEQMESWEPSPELKVTSAPPATSELFQEAGPGGPVEETDGQSRGLSSAGSLSASFQLSVEEAPAEDADPSLEPYLVASSQALTERGQPLDFHLSLEDLYCCMPQLDAAGDRLELRSEGVPRIASGVSESCPSVGDATGPSESSQQQRAGSSDVRLSAQHHRMRRKAAVKRLDPAQLPCHWVCPVAEVLVPDSQTRPLEAYRGRQRGEKTKARAELQALGPSTRVSPAVFFPLRPGVPFRALDSGPALQFPTLNLGLSSPSFRSKLSLPDSRIRFLTAHPVLPDVARSLSPKLWPSARWPSGWEGEAELLGELWTGRTRVPPQGLELADREGQDPGRWPRTTPPVLEATSQVMWKPLLLPEALKLAPGVSMWNRSTQMLFSSGVPEQEDKEGSTFPPVEQHPIQTGAPKP | |||||||||||||||||||
1 | 1xi5A | 0.06 | 0.06 | 0.91 | 1.15 | EigenThreader | ENIIPYITNVLQNPDLALRMAVRNNL----AGAEELFARKFNALFAQGNYSEAAKVAARFQSLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYLRAN----VPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRI---SPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALK---NNRPSEGPLQTRLLEMNLMHA-------PQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNN-------LQKYIEIYVQK--------------------------VNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFWLEARIHEGCEELAKIYIDSNNNPERFLRENPYYDSR | |||||||||||||
2 | 4btgA | 0.13 | 0.12 | 0.94 | 1.40 | SPARKS-K | KNQLSVGALQLPLQFTRTFSASMTSEWEVGKGNIDYARLFFQYAQAGGALSVDELVNQFTEYHQSTACRKLTAYITVPPTLEQLRHHITTDFVCHVLSPLG-----FILPDAAYVYRVGRTATYPNFYALVDCVRASDRRMLTALSSVDSKMLQATFKAKGALAPASQHLANAATAFERSRGNFDAPSTPK---ELDPSARLRNTNGIDQLRSNLALFRGRAEVIFSELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVYEDWQFAKEITPVKANNSNQRFLDVEPGDRMSATLAPIGNTFAVS-AFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVERDYALDRDIAALRTGIVDESLEARHYAVAHNPEVVVSEHQGVAAEQGSLVWNVRTELRIPVGYNAIE------GGSIRTPEPLEAIAYNKPIQPSE--VLQAKVLD----------LANHTTSIHIWPWHEASTEFAYED-------AYSVTIRNK-RYTAEVKEFELLRRERVRLKPTVAMWYSFVEDDRTLAAARRTSRDDAEKLAIDGRRMQNAVTLL | |||||||||||||
3 | 2nbiA | 0.13 | 0.11 | 0.78 | 1.01 | MUSTER | ------------------------------------------------------------------------------------------------------------QPS---DLNPSSQPSEC----ADVLEECPIDECFLPYS-DASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPD-CDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSR-PLDCTDPAV---RPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVPIDACFLPKSDSARPPPFPNPSCCPFECSPDNPMFTPSPSPPNCSPTMLPSPSPSAV---TVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTPTQCRPDNPMFSPSPPPVCSPTMMPSPLP | |||||||||||||
4 | 5i4mA | 0.07 | 0.03 | 0.52 | 0.67 | DisCoVER | RLALVTVDTMGNVFMRRAGRVAAPVVTGSHADSQ-----------------------P---TG--GR--F---D-GIYGVLGGLEVIRETE-HP-----VEVV-IWT-NEEGS-R----FAPAMVASGVFAGVFPLGL------------------------------------------------------------------SRKDVDGKTIGEELARIGYAGDA-------------------------------------------------------------------------------------------------------------------PCGKLHAAFELHIEQG-PILEAEKTIGV----VTDAQG-QRWYEI-TFTGQRDALGAVVDLVNIGLDHAPYGCATVGMMQVHPN--------SRNVIPGRVFFTVDFRHMDLGVARIAAD---IGL-DT------ALEQIFYYAPI--A--FDSACVAVRAAAFYSHIVSGHDACYLA--------QVAPTSMVFVPCISHEDAWIEAG---------ANVLLHAMLRACEP-- | |||||||||||||
5 | 2w00B | 0.07 | 0.04 | 0.57 | 0.67 | DEthreader | QES-L----IQDLRNQ---------------RIH---------ENRYDVTILPLVQFYLQLFFANTTKRDK--------NSFDFTNW---LIKDLKDFTATCF-Q-KHTLLNV-LVNYSVFDTLLVRPYQHTSGKTSAARFVTEYQSVNGSTTIQFDECHRSQ---A--------------GFTGTPIF-PE-NALG-----SETTASVFGR---EL-----H-SYVIT---------V---ETETDEKKLSA-------------ITYILFRQKTHRTFPGSKGFNAR-------TFTTNGQNYYRDLAQRV------KNQDIDLLIVVGFL--TGFDA--P--NT--FSRNRIYD------A--TK----------------TFGNIVTFRDLE---------------------------------------------------------RSTIDAIT------TKNVVLEKTDAATGEAKRGFTVVSELEQRKEKDFVKFGEYLRAENI---------LQNYDEFA--------DVVFEVD-LLKSQEINLDY------------------- | |||||||||||||
6 | 6d6vA | 0.07 | 0.07 | 1.00 | 0.59 | CEthreader | VQMKRFENQKVLDYICFMDVFDVEWFVDLKNQKFTQKRKYISDKRKILGDLIVFIINKIVIPVLRYNFYIKEGSQIFYYRKPIWKLVSKLTIVKLEEFQKYPQGKLRIIPKKGPIMTFLRKDKQKNIKLNLNQILMDSQLVFRNLKDMLGQKIGYSVFDNKQISEKFAQFIEKWKNKGRPQLQSDLIQDTYFINKYLLFQRNKRPLLQIQNFPYYFNLKERQIAYSLYDDDDQILQKGFKEIQSDDRPFIVINQDKPRCITKDIIHNHLKHIGKLEEEYTQFLKNAEQVNGSINLLMRLTDDYLFISDSQQNALNLIVQLQNCANNNGFMFNDQKITTN-FQFPQEDYNLEHFKISVQNECQWIGKSIDMNTLEIKSIQKQTQQEINQTINVAISIKNLKSQLKNKLRSLFLNQLIDYFNPNINSFEGLCRQLYHHSKATVMKFYPFMTKLFQIDLKKSKQYSVQYGKENTNENFLKDILYYTVEDVCKILCYLQFEDEINSNIKEIFKNLYSWIMWDIIVSYLKKKKQFKGYLNKLLQKIRKSRFFYLKEGCKSLQLILSQQKYQLNKKELEAIE | |||||||||||||
7 | 6gmhQ | 0.07 | 0.07 | 0.94 | 1.00 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQ---EDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDI----AKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGDVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHSVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQD-----HPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALA | |||||||||||||
8 | 6tb4D | 0.26 | 0.03 | 0.14 | 0.36 | HHpred | --ECRQASFTFRKAKR-----------------F--REWCGLSHLAESSDDVIDILGEMVCSITEEALIVKMLEEVRPITSGHVLEAWRRLQKRNVEKK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 6d6vA | 0.15 | 0.03 | 0.18 | 0.33 | MRFsearch | ---------------------------------FSCQEERDL---------FLEFTEKIVQNFHNINFNYLLKKFCKPENYQSLKSQVKQIKLYEFVQMK-----------------------------------------------------------------------------------------------------------------------------------------------------------RFENQKVLDYIC---------------------------------------------------------------------FMDVFD--VEWFVDLKNQK----------------------------------------------------------------------------------------------------------FTQKRKYISDKRKILGDL------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 2cseW | 0.13 | 0.12 | 0.95 | 0.65 | FFAS-3D | PRKTKGKGTSNREQYRARPAELPMKNNDETPDKVNEHS----EAKDEADEATQKQAKDMSTRIAEATSAIYQCHVCSA-VLFSPLDLDAHVASHGLHGNEIQRHITEFISSWQNADTPRLVTWDAGLCTSFKIVPIVPAQVPQDVLAYPEAAVSRIVVHTRWASNVD------FDRDSSVIMAPPTENNIHLFKQLLNTETLSVRGANPLMFRANVYLNRHTGFSQDHTPFTEGAPGPDAEKWYSIMYPTRMGTP---NVSKICNFVASCVRNRVGDALTVSPTEIEWALTECAQGYVTVTSPYAPSVNLMPYRISNAERQISQIIRIMNIGNNATVIQPV------LQDISVLLISPLQIDPTIISNTMSTLSPASSILGKLRPSNSDFSSDDSSYPKDGGSVTSLLTTDPCAPVKAFMTLANMMVGFETIPMDNQIY------TQSRRASAFSTPHTWPPIDAPI-LRQWAEIIHRYWPNPSQIRPNVFGSANLFTPPEVPIDHQPANVTTPTELTNWRARVCELMKNLVDNQRYWTQSLVSSMRGTLDKLKLIKSMTAPMLPFPPFQVPYVR- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |