Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MHLLTETAMGDSMGYEVLSFEEVEELKKEYSLLSTRVEATKRKLALETKLRDAARSLSRLHSPKSSRTSEDYGSDPSPGSHRKRRSIFGRNGDDNYDKADEELATSTRKCEDLAQELWRLERRTQDIQRRLLQHTAGILQMT |
1 | 6gy6B | 0.10 | 0.08 | 0.89 | 1.17 | DEthreader | | QANTIWLLAQRQSGIIIRLQDLVTQTESQKTELQSDIDPKTEKRNKLDADREKIIESQDVIRQNNDM-D--AK-----------LGKVSE-G-LKYIDLADARMKLSDQIDQLITETDELKAKIREVELRLSGLKDVMQIDR |
2 | 6ek4A | 0.08 | 0.07 | 0.89 | 1.17 | DEthreader | | -----NIRLHQQKIQEILLESSLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDVIR--QYNL---LDLANPKKELIKQ-IKV-----LKYIELADARAKLDERINQINKDCDDLKIQLKGVEQRIAGIEDVHQIDR |
3 | 3j9tb | 0.09 | 0.08 | 0.94 | 1.17 | DEthreader | | EGDTDDGSGELYV-PPSGSV--IDDYVRNASYLEERLIQMEDATDQIEVQKNDLEQYRFILQSDEFYTEFIVRADAN--Y-DVDSSNEG-RSQ-QLAKVNKNLSDLYTVLKTTSTTLESELYAIAKELDSWFQDVTREALGI |
4 | 2zdiC | 0.12 | 0.10 | 0.82 | 1.17 | DEthreader | | -----------------QNNKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKIEEEKP-------KGVIVDKNNARSIDE-AISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQKQSMTS |
5 | 2zdiC | 0.14 | 0.12 | 0.85 | 1.17 | DEthreader | | -----------------QNNKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETL---ENLKKI-E-PEILKGVIVDKNAIVVERSDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQKQSMTS |
6 | 2ke4A | 0.18 | 0.12 | 0.66 | 0.50 | HHpred | | -----------TEDFSHLPPE------QQRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQ---------------------MG-----DPASLEPQIAETLSNIERLKLEVQKYEAWLAEAESRVLSNRGD----- |
7 | 3na7A1 | 0.08 | 0.06 | 0.77 | 0.65 | DisCoVER | | ---DLDKALNDK------------------EAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSE-RELRSLNIEEDIAKERSNQANREIENL---QNEIKRKSEKQEDLK------KEMLELEKLA-- |
8 | 4rsiB | 0.11 | 0.08 | 0.76 | 0.37 | MRFsearch | | --EPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILKKTHKQELQDLILDL--------------------------------KKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQ |
9 | 6vy1A | 0.12 | 0.10 | 0.85 | 0.79 | SPARKS-K | | ------------------INEAVRAYIAQIEGLRAEIGRLDATIATLRQSLATLKSLKTLGEGKTVLVPVGSIAQVEMKVEKMDKVVVSVGQNISALEYEEALKYIEDEIKKLLTFRLVLEQAIAELYAKIEDLIAEA---- |
10 | 4e40A1 | 0.07 | 0.06 | 0.81 | 0.82 | MAPalign | | ILAKGGAAVERASAARKA-AAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANG--------------------------DATTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETES |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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