>PF15453 (390 residues) PGHARQSSSAASDQQHVNGMCRGQASPDGPSAEDMAPSFEKLNPYPAPPPPHPLYPGRKV IEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEEAGERQRTVPNSPAVSDGGWRSG TSSSSGGGHASLPRTPQQTDVTDPLSSQSSPFSSPPQPPSAFASSGSSEEDLLANWQRMF VEKMAPSSEGTLINRTSFSSETVKELHRSRNSKSGRGAADHGMMRGAYSDGEEGSSAQSW TASRESSLDTDTSSVADLRSKRGHYGGDFSQEEGEHLLMGTDNEDGASGDTMVMVESSPA SAKRQEFVEDVGSASSLTEERDVLPQDFPVVGSRVLAGLEDYTDKPPSQRQHHHHQSGSS RPHKSPKRMGVHHLHRKDSLTRAQEHGNLL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PGHARQSSSAASDQQHVNGMCRGQASPDGPSAEDMAPSFEKLNPYPAPPPPHPLYPGRKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEEAGERQRTVPNSPAVSDGGWRSGTSSSSGGGHASLPRTPQQTDVTDPLSSQSSPFSSPPQPPSAFASSGSSEEDLLANWQRMFVEKMAPSSEGTLINRTSFSSETVKELHRSRNSKSGRGAADHGMMRGAYSDGEEGSSAQSWTASRESSLDTDTSSVADLRSKRGHYGGDFSQEEGEHLLMGTDNEDGASGDTMVMVESSPASAKRQEFVEDVGSASSLTEERDVLPQDFPVVGSRVLAGLEDYTDKPPSQRQHHHHQSGSSRPHKSPKRMGVHHLHRKDSLTRAQEHGNLL | |||||||||||||||||||
1 | 2vowA | 0.03 | 0.02 | 0.53 | 0.81 | DisCoVER | VAEVVETFKNPGTYSSPVINFKIASPPGPGTPIYGPRDFSSYSLAI-G-KTSYYDPTTWRGWTHTGKWSFFNITLSVQRDGAHP-GFILFWRLWGTQDLDDSDTVIGHVI----------------------------------------VQ---------------------------HADWTLQGLPPKAD-------------H--TAPAGVDT-YPMKPDSYTMYY---------VD-----------------------------------SGYDAD----KYVASKKLIM-----------------------HPTAFLALNDGTAG-----------------------AFTKSIGYYMLYVANVLELVAKGCWVNI-TISK- | |||||||||||||
2 | 1l5jA | 0.06 | 0.04 | 0.68 | 0.67 | DEthreader | ----VPPGVDEAAM--LSARPDIPLHA---------L-AMLKNARIGPQIEQPLAYVGDVVGRKSATNSVLWFMGRGGGLCLGKIAPIFFNT-ME------DAGALPIEVD------DVIDVY--PYKGEVRNHETG------FELKTDLR--------------------------QDTTGPMTRLFLVMQS---------FCHTAAPDVHHLPISLRPGDGVIHSLGTGGDHTRFPISFPVFLRL-----EGLPDL-KVE-AF--LTDASAERSA--------P-YS------IKEP---PLSAVQGE--KIDEVFI-GS-CM--TNIGHFRAAGKLLDAHKGVFGKSGA--------LCMGNQA----STRNFPNRLGTG------- | |||||||||||||
3 | 1vt4I3 | 0.08 | 0.08 | 1.00 | 0.85 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5uz5E | 0.04 | 0.04 | 0.93 | 0.58 | EigenThreader | LTQMVDVIEQTVVKYGNPNDSIKLALETILWQILRKYPLLFGFWKRFAT-----------IEYQLFGLKKSIAVLATSVKWFPTSLELWCDYLNVLCVNKQFLSHPFWDKFIEFEVGQKNWHNVQRIYEYIIARFFTSYKKFLNEKNLKTTRNIDIVLRKTQTTVNEIWQFESKIKQ--------PFFNLWSRYLYHENTVDIYQKANTFLPLDFKTNETVSRYLKIWPNDILLMTEYLCMLKRHSFKNSLDQSPKEILEKQTSFTKILETSITNYINNQIDAKVHLQTLIN--DKNLSIVVVELIKTTWLVLKNNMQTRKYFNLYQKN--------ILIKNSVPFWLTYYKFEKSNVNFTKLNKFIRELGVEIYLPTTVMNDILTDYKT | |||||||||||||
5 | 6j0qA2 | 0.24 | 0.04 | 0.17 | 0.35 | HHpred | ------NPHDNLVVQPQNGRCTIDGLLQGTT---------------LAPPVMPVYPGEQLLFFRS----QLP------SSGGVVGGWLDCLLPQEWVQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.10 | 0.05 | 0.46 | 0.67 | MRFsearch | -GFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGMDLYKTSKAAQDVW------------------------------------------------------------------------------NRADNHFKDTYGFSILDIVIN---------NPVNLTIHFRIRENYSAMIFETIVD----------------------------------------------------------GKLKTEKIFKEINEH---- | |||||||||||||
7 | 5kcs1w | 0.10 | 0.09 | 0.90 | 0.55 | FFAS-3D | ----SIRFQNCSLFPLYHG-----SAKSNIGIDNLIEVITNKFYSSTHRGPSELKRQRRLYSLHLRDSVRVSEKE---------KIKVTEMYTSINGELCKIDRAYSGEIVI--------------LQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISYYVDSTTHEIILSFLGKVQMEVISALLQETIHIEVPPNPFWASIGLSVSPLPLGSGMQYESSVSLGYLNQSFQNAVMEGIRQGLYGWNVTMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYNDAPVDTQLKNNEVILSGEIPARCQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNK------- | |||||||||||||
8 | 5jcss | 0.08 | 0.07 | 0.87 | 1.14 | SPARKS-K | PSRGETVKAANGFQSTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPS-------------EEDLTHILA----------------------------QKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHTRVVSVCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKAL---------EPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIKEKLNIQKKSMNTNHSLRLMEQISVCIQMTEPVKTTVVQQLINVSQQTETGDLLGGYKPKTVAVPIQENFETLFNATFSLKKNEKFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQ | |||||||||||||
9 | 2ijgX | 0.08 | 0.02 | 0.25 | 0.35 | CNFpred | ----------------------------------------------------------VTILWFRN-DLRVLDNDALYKAWSSSDTILPVYCLDPR----------------------------------------LFHTTHFFNFPKTGALRG-------------FLMECLVDLRKNLMKR------LNLLIRSGKPEEILPSLAKDFGART-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6mu1A | 0.04 | 0.03 | 0.67 | 0.67 | DEthreader | ------QFWKAAKPG-------------HHAADKNELLHSNKYL-------------------L-GSFYIQPFYKLRDKVVLNQPLHAEVNS-RSVTKLLEDLVYTGGTNSG--QDVLVKRVLRHQIRFY-PEKEIMDPPLVSAKHTEGASNLVLLNTQH---ENHNRDLQNFLRCLVCETLQFL-----------NNCIATHESNGIDIITALILNDMVLKNASLAILYMRPKLVEVKYAHARHNKE-LQTMLKPGGQV---D---G-D-AL--EFYA---------KHTAQIEIVRLDRTME--------RDEQGSKIFFICHKEENH-CFI-LV---------DSTEYTESY-A--------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |