>PF15444 (206 residues) MATEDREMMEARGAGESCPTFPKMVPGDSKSEGKPRACLEAESQKPDYSCDHLEEMEACE DGGCPGPPKSLPPKSCPATKGQAGDGPKPAELPPAPGTEHNAEMDLEKVRMEFELTRLKY LHEENERQRQHEVVMEQLQREASPHLFSGGLQDLLLPQNQFAMFLYCFIFIHIIYVTKEM VFFLFSKHYLFCIATILLCLIKTFWS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MATEDREMMEARGAGESCPTFPKMVPGDSKSEGKPRACLEAESQKPDYSCDHLEEMEACEDGGCPGPPKSLPPKSCPATKGQAGDGPKPAELPPAPGTEHNAEMDLEKVRMEFELTRLKYLHEENERQRQHEVVMEQLQREASPHLFSGGLQDLLLPQNQFAMFLYCFIFIHIIYVTKEMVFFLFSKHYLFCIATILLCLIKTFWS | |||||||||||||||||||
1 | 6h4hA | 0.06 | 0.05 | 0.91 | 0.61 | DisCoVER | RRVDGWPVG--LKNCWSAVQSLFQPEFLSELQYLFALMMGSNRKFVDPDVSLFYGTFLTEGVNNETFGQYLEGAMVEGQERWFTKLPPVLTFELSRFEKIHNKL-EF--PQ--II--YM-DRYMYRSKELIRNKRECIRKCIASTTIEQMYCDPLR-----Q--VPYRLH-AVLVHDYWAYIYYNDISVSYGSAYCLMYINDFID- | |||||||||||||
2 | 1gpeA | 0.05 | 0.04 | 0.82 | 0.67 | DEthreader | SDPSKVAG-----I-IAGGGLGKGST-I-N----GDS--WTRPDKVQID-WEM-GWNDNM--EY-KKAEAAATCHGT---N----GTVAAWLLYLEILVFAEVLLPILIGLVPVGINMRGGFHNVTALKVQYENYRWLLVAFA--DL-PFTRGDPKFFRPNWH--AVSSCSMMGVVDATAKVY----GLRV-IDGSIP-VMTIFYG | |||||||||||||
3 | 5y9dA | 0.08 | 0.08 | 1.00 | 0.51 | CEthreader | TPHIGATKWWIGGAAHTSTHCVCFAKLIVHGKDYGTRNFVVPLRNVHDHSLKVGVSIGDIDGVDNGWIQFTNVRIPRQNMLMRYAKVSDTGVVTKPALDQLTYGALIRGRVSMIADSFHVSKRFLTIALRYACVRRQFGTSGDTKETKPYHQRRLLPLLAYCYAMKMGADEAQKTWIETTDRILALNPNDPAQKNDLEKAVTDTKE | |||||||||||||
4 | 4ui9J | 0.05 | 0.05 | 1.00 | 0.52 | EigenThreader | NPVSWFAVGCYYLKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGTAEKWFLDALEKIKAPLLNNLGHVCRKLKKYAEALDYHRQALVLISTYSAIGYIHSLMFENAVDYFHTALGLRFSVTMLGHCIEMYIGDSE | |||||||||||||
5 | 6hcyC | 0.21 | 0.19 | 0.92 | 0.40 | HHpred | ----------MLQCGQKTTLLPSGAEVLSYSEAAKKSGIIAI---HREHYDFLTELTEVLNGKVPGAHVTISLQSGALDSRQCGNDSKAKNLPMDQGSL-MAAKEIEKYPLSAVLCVFLFFYCEKKTFRMVIAAILQLYRGTKYRRFPDWLDHWMLCRKQLGLVALGFAFLHVLYTLVIPIRWRLGLSDSYVALGILFVLLGI--- | |||||||||||||
6 | 4pl0A | 0.11 | 0.07 | 0.65 | 0.32 | MRFsearch | ---ILAKITDLLSG---------------------------------SLSNFSYEYLVLL-------------------------------------ACLYMFCVISNKASVFLFMILQSSLRINMQKKMSLKYLRELYNENITGYTTQSLNQASNDIYILVRNVSQNILSPVIQLISTIVVVLSTKDWFSAGVFFLYILVFVIFN | |||||||||||||
7 | 1nekC | 0.13 | 0.07 | 0.56 | 0.68 | FFAS-3D | -------------------------------------------------------------------------------RNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFV-----------KFIMWGILTALAYHVVVGIRHMMMGKRSAKISFVITVVLSLLAGVVW- | |||||||||||||
8 | 5yfpE | 0.06 | 0.06 | 0.98 | 0.81 | SPARKS-K | LFGKFTKSLIDYFQLLEIDDSNQIL--STTLEQCFADLFSHYLYDRSKEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANSLNDVDSMLKCVVESTARVMELNKAHLYILEILKIMFLGIVDSYMEIALEVAYTAGVVNLNF---LKFISMSTEILDLLSISIKSIFLPLMTNSQIQKMEILIN | |||||||||||||
9 | 5w81A | 0.11 | 0.05 | 0.48 | 0.58 | CNFpred | --------------------------------------------------------------------------------------------------------AATPLAIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLI--MSLKGLWTIRAFE--RQAYFEALFHKTLNTHTATWFLYLSTLRWFLFRADILFVFFFTLAA | |||||||||||||
10 | 6r9tA | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | QRLHAAKQAAASATQVAEQILLAAAEMSALSVQNLAGLRSLAAAVCVL--Q--VELVQASRLRASFSLLAAAIN--CDSVMNSLGAMISAALNPR----DP-PSWSVLAGHSRTVSDSIKKLITSMRD-KAPGQESLGHKVSQMAQYFLTTVLTLNASAVVGGALQCSPSDAYTKK---KP------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |