>PF15441 (483 residues) MEDEEPQHGASTSIPDIAEFDAIPEALMRSSQTLALGPEAQEGQDPSYKWAEGRRLLETQ QRDLRDVNDYATESMISFPKEASADVETNQDNLMAEACDTPERQEAVPQSLADRQAETLA PPELWACPVQGEHLDMVPISSELGSRMEVEFRTELTSLILGTEQAEEKENNSPDTSAQTR FWPSCEEHPAETSRPQDSEIGTVRQGEELQSMGVQEIQGREGLMCPQEAEGLEAQGQEEV GFQGAGSLGEDVCSDGHLGEQEHMGQQVNDTEEEQKQKQEQIQDDVMLAKQGEREGLNGG LGSLNYAEWERRTQCQGDLEQGGQRQREWRGPEESRVDTQYEENQSLVGKSVEVTKKQED QGLWGTLMPVEAQEEEVGSSKEDPGNWGGAALGGVGGERNPEEGEEHDGPSTVALVAPEV SSPCDLFPDTCYPMTRIPRTQTEPRAEELCPKALSPTLEPIGWSHQPISVPSSFPAGESP DQE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEDEEPQHGASTSIPDIAEFDAIPEALMRSSQTLALGPEAQEGQDPSYKWAEGRRLLETQQRDLRDVNDYATESMISFPKEASADVETNQDNLMAEACDTPERQEAVPQSLADRQAETLAPPELWACPVQGEHLDMVPISSELGSRMEVEFRTELTSLILGTEQAEEKENNSPDTSAQTRFWPSCEEHPAETSRPQDSEIGTVRQGEELQSMGVQEIQGREGLMCPQEAEGLEAQGQEEVGFQGAGSLGEDVCSDGHLGEQEHMGQQVNDTEEEQKQKQEQIQDDVMLAKQGEREGLNGGLGSLNYAEWERRTQCQGDLEQGGQRQREWRGPEESRVDTQYEENQSLVGKSVEVTKKQEDQGLWGTLMPVEAQEEEVGSSKEDPGNWGGAALGGVGGERNPEEGEEHDGPSTVALVAPEVSSPCDLFPDTCYPMTRIPRTQTEPRAEELCPKALSPTLEPIGWSHQPISVPSSFPAGESPDQE | |||||||||||||||||||
1 | 5jcss | 0.11 | 0.11 | 0.98 | 1.53 | SPARKS-K | -------TFVPTH-KTVSSLRQLGRKIQNSTPIMLIGKKIHLGEQTTYTSGDKPGTFEWRAGVLATAVDKAPEKRELTIPSRGETVKAANGFQLISTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHTRVVSVRDILFKNNGINKPDQLIQSSVYDSIFSEAADEFKALEPIIQSSRISLFLTQHVPTLENLDDSIKRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPGEAKMLAKKLTVINVSQQTETGDLLGGYKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFSLVKTIRAGEWLLLDEVNSDLDSRSILLSEKGDAEPIKAHPDACMNPATKRDLPIYVHSPERDITDLLSI | |||||||||||||
2 | 2nbiA | 0.12 | 0.12 | 0.99 | 1.26 | MUSTER | LNPSSQPSECAEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTA--VGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPS-SQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDVGRPDCNVLPFPNNIGCPSCCPFECSPDNPTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDG--SPPVCSPTMMPSPLPSPTE | |||||||||||||
3 | 4j94A | 0.10 | 0.06 | 0.61 | 0.74 | DisCoVER | --------------------IDPP--VIDAGAV--P-P------DETGPDQIQTGTVAVI---DTGVNGPAEPGGDFVDAAGN--GSDCDGTTAAIIGGRPSDGFVGAPDVRL-LSLRQTSQPTAGSIRSLARSVVHAANLGAQVINISEAACDETSLGAAINYAV-------NVKGAVIVVAAGNTGDCSQNPPPAPSVPSDPRGWR-------EVQTIVSPAWY---------------AP--------L----VL----------------------------TV-------GSIGQNGQPSNFSS---G--------PWVG-AAAP-GEN-LTSLGYDGQPVNA----------------------------------TPGEDGPVPL----------------NGTSFSAAYVSGLAALVKQRLTPAQIINRITATARHPGGGV-DNYVGAGVIDPAIDGPEKAPF------------ | |||||||||||||
4 | 1t3tA2 | 0.06 | 0.04 | 0.64 | 0.67 | DEthreader | TNTAISPWPGATSGGEIREGKPKA-GL-VGFSVSNLRIPDKVTLDIMTEGPLGGAFN--ALTGYFRT-----YHKPIML---KAGDA----AVKRVLHLP--T-V-AEKTF------LVTIGDRT--DQMQVPVADCAVTTASYYGEAMSIGER---------------------------I--T---------------QIGDIKRIKLTFARV-E-D---VRHTLTPQILKGFYDAMQALVAA-RKL--LAWHDRGGVIQVRAEDRAV---------------------------------------QCADQEHE-A----TDPGLNVKLSFDINE---A---ARPKVAVLREQVSH-MAAFAFDAIVIGLGNFHAL-ILRVRDEFEFFALGCQMSNLR-----FV---EA---------L--------PIA---DNFGKTETYPANPNGSPNGITAVTIMMPHPER-------------- | |||||||||||||
5 | 3zwuA | 0.07 | 0.07 | 1.00 | 0.52 | CEthreader | KGYKSSVLISWGQPLHKNGPAFDPSGNGTAAAQEVQFGDNNDGMSLFEFPGEKNRALMAINNEYTNYRYLYPHGGMPQSAEDVRKALACEGVSVIEVQRKNGQWQFVQGSRYNRRIHGNSPLRISGPAAGHEL--MKTSADKHGKKVLGTFQNCANGKTPWGTYLTCEENFTDCFGSSNAQQQFDPAQKRYGVSAASREINWHPFDPRFDMAKNPNELNRHGWVVEIDPFDPQSTPVKRTALGRFKHENAALAETDDGRAVVYMGDDEDKINHRNAKANRDILDHGTLYVARFDAGDGNPDHPKGQGQWIELTHGKNGIDASSGFADQAEVLIHARLAASVVGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG | |||||||||||||
6 | 5t8vA2 | 0.04 | 0.04 | 0.92 | 0.65 | EigenThreader | ----SLSEHVILMVQTVKRGNVALQALLSPSSKTSQASMEVCRKLVGSMFDLIDNNVLMIFAKAEASLFTFEQLRLLYIASIGTSEDLTVSRAVVVIYRRVLPQLSSAHAQFLTDVRKELLPVVAKVPRALLDDVMACLWIISTLLGTYEPLARLVISSLKGIQKTRASAQVQPLDSLIVGMAGKHCNLDSHHEMFKGASVSKLMVDIVVPFAAPSWPLDVRKPALDCVGLVCQSSPRNYVAANVYTAFQQVFDDQIPILETMVLRSLKEFLFSEEKRSE------------TNYDDVASATTHRFLKDITRIATSTQD--------DHAFLAVEVLASINRQGVTFITLATSTHPRISELAFLEHKALHTKHETVIEREYAKAIQSIFAYQRDIVKDPRGATTNPFTPKLHLFMEVLKISKAKNRVKFLEKLVSQ-------------IDFDIAKLELPPHVQYSRFIIENLAFFEYVTVGE | |||||||||||||
7 | 6tgbA1 | 0.20 | 0.08 | 0.39 | 0.30 | HHpred | -------------------GGGFPEIIMPGDV-------------------RNDIYITLLQGDF---DKYNKTTQRNVEVVCAEDGKTLPNAICVGAGDKPMNYRSVVY-YQVKQPRWAVPIE----DMQRIHLRFMFRHSSLESKDKGEKNFAMSYVKLM----KEDGTTLHDGFHDLVVGDSKKMEDASAYLTLPSYRHHVENGGLSV-----SS--RDVFSIS-----------------------TLVCSTGGGGGGIMMEH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 2pffB | 0.21 | 0.06 | 0.31 | 0.92 | MRFsearch | ------------------------------------------------------------------------------------------------------------------------------------GLGVLTHRNKDGTGVRVIVAGTLDI-------------------------------------------------------------------NPDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------------------------------------------------------- | |||||||||||||
9 | 1kvpA | 0.10 | 0.08 | 0.80 | 0.49 | FFAS-3D | TGAERMPHDLSHLGFLAGQIPVIAVGALRLS--PLRRGLAIDSTVDIFTFYVPHRHVYGEQWIKFMKDGVNATPLPTVNTTGYID--------HAAFLGTINPDTNKIPKHLFQ-----GYLNIYNNYFKAPWMPDRTEANPNELNFRCCHLKNIWTAPLPPET-----ELSRQMTTSTGMAPVTTKFRDVPNLSGTPLIFRDNKGRTIKTGQLGIGPVDAGFLV--------------AQNTAQAANGERAIPSNLWADLSNATSIDIMGLQAAYANLHTDQER--------------DYFMQRYRDVISSFGGKTSYDADNR-------PL----------------------------LVMRSNLWAS-GYDVDGTDQTSLGQFSGRVQQTYKHSVPRFFVPEHGTMFTLALVRFPPTATKEI--QYLNAKGALTYTDIAGDPVLY-----------GNLPPREISMKDVFRSGDSSK-- | |||||||||||||
10 | 5yfpD | 0.06 | 0.06 | 0.95 | 1.45 | SPARKS-K | HNGFTSLENYLYNIVNID-IMEHSKTINKNLEQFIHDQSLNKQENEGFNRIGNKNIITERKEEIHNIIVKSTESIRKHPSLLKMATSLKNDNHF----------GLPVQDILSIILRECFWEIFLKLLYAIQCHRAIFEMSNILQPTSSAKPAFKFNKIWGKLLDEIELLLVRYINDPELI----SSNNGSIKPINGEDNSSVKDQAFELKALLKDIFPPPSVFNMKVILDPFLLFTQSTSTIVPSVLTQNTISSLTF-----FDDYMNKSFLPKIQMTMDYLFTVEVESNALELSDENHNIFKTALDFQRLFYNLNVFNTANTFREKISYCILDLLNHFYNYYLGLFNSLIGTSDRHLTRKIITAWLQNGILMDQEQKIL----NGDETLFHEESIELFKEIPHFYQAGKGLSKFNNLTLDTILQFSASVLWILNWLPGLKKAINIDEVSQEPMLDADRLRSSWTFSESMDLNYSNPSSSPN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |