>PF15438 (195 residues) MQNQKNQKSLVAKVLVLFAAVALMFVGVQVFADDKLDLNTLECKDALELTAADAADAEKV VKQWKVQNTSLNAKVTKDSVKVAVADNKVTVTPADGDAGKALSGSKILNLVGVCELNKLT LGTEKKLTLTVKDGKVDAEAGLKALKEAGAKVPATVNKDDVTFTVGKDDNANKVTVKAVD GKTTVSGQVVFEFTV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MQNQKNQKSLVAKVLVLFAAVALMFVGVQVFADDKLDLNTLECKDALELTAADAADAEKVVKQWKVQNTSLNAKVTKDSVKVAVADNKVTVTPADGDAGKALSGSKILNLVGVCELNKLTLGTEKKLTLTVKDGKVDAEAGLKALKEAGAKVPATVNKDDVTFTVGKDDNANKVTVKAVDGKTTVSGQVVFEFTV | |||||||||||||||||||
1 | 4hu2A | 0.13 | 0.10 | 0.81 | 0.65 | DisCoVER | -------------------LV--P----------KLTASVVGVTVPVSVTAADGV-LA-AV--TMVNDRPVAGRLSGLRWSTTEGYNRRYTLNATALGLATRQLTFQTSSPHLTMPYVMPGDGEPVAIRFDENIADRAEKAI-KITTNPVEGAFYWLNNREVRWRPEPGTAVDVAVNTLGEGMFGEDNVQTHFT- | |||||||||||||
2 | 6r9tA | 0.05 | 0.04 | 0.74 | 0.83 | DEthreader | --KAWRKNKMDESKHEIHSQVDAITAGTA-SVVTVAVT----------TISSNLTEMSRGVKLLAALEGSGLLQAKGLAGSLQIGESDT-----------------APTISSPVCQE-HATGAVQHKQASQTAAAQLSCKAVAEQI-P-----L---------LVQGGSAQAQLSFLGGVAAKNLGALEL----- | |||||||||||||
3 | 2fkjA | 0.14 | 0.13 | 0.94 | 0.64 | CEthreader | SEKKITRADKSSTEEKFNEKGELSEKKIT-RADKSSTEEKFNEKGELSEKKITRADKSSTEEKFNEKGEVSEKIITRTRLEYTGIKSDGSGKAKEVLKGYVLEGTLT----AEKTTLVVKEGTVTLSKNISKSGEVSVEL-NDTDSSAATKKTAAWNSGTSTLTITVNSKKTKDLVFTKEN-----TITVQQYDS | |||||||||||||
4 | 6wilA | 0.05 | 0.05 | 0.90 | 0.58 | EigenThreader | NILGKQSLHNIVNYAQNELLKKKRLDQGLENLKRVDTGTYPFHLNDILSLNVSHSLDD----------FHESLNRSYFISYQLPVGYYDLGFSYNDYQYRQGLNLSRVISRSGRLNWRGQYAPKDRFYIGGRYSVRGFD---------GELLPNTQFYA-VDQGVNGRNSQRYLLGSVLGSFTGRGLIAVTGFSI | |||||||||||||
5 | 2bolA | 0.18 | 0.13 | 0.70 | 0.38 | HHpred | ------------------------------------------LKDAYEVGKD---------GRLHF-KVYFNVNFKAEEITIKADKNKLVVRAQKSVAQATITTDDVLVIEAPVNEPNIKLSPEKGLAIQPSEVQE------RQLAVKNKEGLEIVTAIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGREFY- | |||||||||||||
6 | 6vg1A | 0.19 | 0.11 | 0.59 | 0.48 | MRFsearch | -----------------------------------------------LISTTDR------------------DSGQNGQVHCTLYGEHFRLQQAYEDSYMIVTKIAEYNLTVVAEDLSPPFKTVKQYTIRVSDEND---------------NAPVFAKPVYEVSVLENNGAYITTVVARDPDFGHNGKVIYRLVE | |||||||||||||
7 | 3i0yA | 0.16 | 0.10 | 0.63 | 0.49 | FFAS-3D | --SESNRQRATGLVQAYYEAFN---------RGDWDALAFLAEDVAHDLNQGPREIGRAAFASFLQRNDSYREQLRDIVVTAVGAEYVVHGVYHTTDEGLPDANGQTYVLPGG-------------AFFDVRDGQINLQEWIAQVSR------------------------------------------------ | |||||||||||||
8 | 4hu2A | 0.14 | 0.12 | 0.85 | 0.62 | SPARKS-K | ------------------------LLVPKLTASVTDGAVGVTVDAPVSVTAADGV-----LAAVTDNGRPVAGRLSPDGLRWSTYNRRYTLNATALGLGGAATRQLTFQTSSPVMPGDEVVGVGEPVAIRFDENIADRGAAEKAIKTTNPPVEGAFYWLNVRWRPEHFWKPGAVDVAVGEG-MFGEDNVQTHFTI | |||||||||||||
9 | 4l6pA | 0.15 | 0.09 | 0.58 | 0.71 | CNFpred | ----------------------------------------------LEAKFEEASLFKRIIDGFKD----------VQLVNFQCKEDGIIAQAVD------DSRVLLVSLEIGVEFQEYRCD--HPVTLGMD-----LTSLSKILRCG--------NTDTLTLIADN--TPDSIILLFEDT--KKDRIAEYSLKL | |||||||||||||
10 | 4qs4A1 | 0.05 | 0.04 | 0.70 | 0.83 | DEthreader | HKDEARRQIVSNALISEIAGIVDFVAEEQITVKEITNPLYYINRTEFINWGAGT-STRIFFTRKCEFKDYIPCEELSKIDRIDFVAERVDFILTF-DKSNFYGLRLSIDPNLGK----------------------FLR-GRVGA--D-K--------------L-------CWN----------NKMSGPCLLV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |