Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | IAVPIVQMDADSEHYAYVPAFDLRVGESGEIIRWFDRSHSAIVARAAVIEVKEGKAKIAFERFKTLDQKAFPNPELTPRKNDEVIFRTFYDRAFLIAPNQELYQKIKDAYPEMTWQHPDLFASYLLDNGTHAPNTEDFRKICDAYSAGIVYIVNLNEGQARDCQTFGLLKKDYITGRVAVEDRMKPFFSRLGSIEQSWFNFIIGGVAVEDYYLYYDALL |
1 | 3zmnA | 0.08 | 0.05 | 0.61 | 0.71 | DisCoVER | | GQKVVNGRNLSDPDSRTVNLPFLMQHPDVAVWAKV--GSTWQPCVITAINYSTGDVTFTEPA------------GVTASDGIEIYYVH-GDGQFRLRVARDAA--T--------VFNQ---------------------------SFSMHSVDQNNVETMIA------W----PQQVELVPGTRLVLEVFTT--------------------QV--PM- |
2 | 3a5cA | 0.05 | 0.04 | 0.70 | 0.67 | DEthreader | | -IQGVIQKIAGPVIAKGMLG-ARMY-DICKVGEE------GLVG-EIIRLDG--DTAFVQVYE-D--------TSGLKGEPVVSTGL--PLAVELGMLTVTHKILV-PPYHTWPV-----V-MTDVLVEFPLM---VLI-ANTSMARAVGIAFRGFSVALMATRWALFYRAGVITLGG--E-EG---------------------------A--VTIVG |
3 | 6xbwA1 | 0.09 | 0.03 | 0.31 | 0.72 | CEthreader | | TFGYVHGVS---GPVVTACMAGAAMYELVRVGHS--------ELVGEIIRLEGDMATIQVYEETS-----------GVSVGDPVLRTGK---------------------------------------------------------------------------------------------------------------------------------- |
4 | 4byxV | 0.08 | 0.07 | 0.85 | 0.78 | EigenThreader | | SVEATILEVKGFGTTIDVILSNG---YLREIVLCGM-NGPIVTNIRALLTVKAALGVKIAAN-----------DLEKAVSGSRLLVVDRVYGAIIAFKVIPSAAQELKNSDIKLFQGNEEEKKKKWMEAIIKPKP-----------AIGGVEVGVTVESMQDKRGQKVAMAIKDAVYGKTI----EGDTLYVDIPEN---YILLTDEELDLMDKIAEIK |
5 | 5kzfA | 0.15 | 0.11 | 0.79 | 0.35 | HHpred | | ----------KKGQTVRLNGTFEAVGEISTLREILADGHR-----ALVVGHADEERVVWLA--DPLIAEDLPTRPRKLRPGDSLLVDTKAGYAFERIPKARQIEQIRDAV-ELPFLHKELYREY----SLRPPK-------------GVLL-YG-------PPGCGKTLIAKAVANSDDAHEAKSYFLN-IKELLNKFVG--ETERHIRLIFQRAREK- |
6 | 5kzfA | 0.15 | 0.12 | 0.79 | 0.50 | MRFsearch | | ---QTVRLNE---ALTVVEAGTEAVGEISTLREILADGHRALVVGH-------ADEERVVWLADPLIAEDLPTRPRKLRPGDSLLVDTKPKGVLLYGPKTLIAKAVANSLYFLNIKGPELLNKFVGET--ERHIRLIFQRAREKASPVIVFFDEMENVIVIGASNLDVKIKIERP-------------------------------DAEAAQDIYSKYL |
7 | 4w4iA2 | 0.08 | 0.05 | 0.73 | 0.44 | FFAS-3D | | --------DGACELLRGIVALRTGTGKKT--------------GNGVVALRNAQLVTFTAMDIDDPRAVGLAHRPPARFDE-------------FSLPTRVGARADERLRSGVP------LGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSP-------------------GTPFAIAVAIQTLT |
8 | 4on1A | 0.08 | 0.08 | 0.93 | 0.56 | SPARKS-K | | WTTSIKEIEESNRPVYLFEGQDILSQSYATIRLQRGG--DLIDYIVYVVCNTGDIKNIRIDPFKGLPIKDYPT---EATYPATLEFMLIKEKHDITSQIQAVTTSLKFLIDSGFITVSSH------KGGASDYEVSALESFQNYLRKPYILLRWDSGKTFGYASGIGVI----HLNNPRGNFEVAAISTTSEHVDNEYSPQVTPNHLSADNWVRMLECI |
9 | 3hrgA | 0.10 | 0.07 | 0.69 | 0.69 | CNFpred | | --------------------------------------KRVNIMIASK--------RFTMIPLELFEEEQAFYHNHQKRENEIVMYNIL-NVVIIFGIDKSTYTFLNEQYPEARFYSQTPLIEYFSIKSRL--------------NSKKMYASVRDAIDIYCFEQLLLANSFECMQTEDRIYYLLYVWKQLEFDELHLTGTL------SDKETLMNELK |
10 | 3a5cA | 0.09 | 0.06 | 0.68 | 0.67 | DEthreader | | -IQGVIQKIAGPAVIAKGMLGAR--MYDICKVGEE----GLV-GEIIRLDG----DTAFVQV-----------YEDTGLEPVVSTGLPLVRRAR-----LDPNTAMGGT-------NADVVV--EFPELTDPPL--RTVLIASIVGVTLMYA------TIVGAVSPVTTIVGSLFTSALDPWY------------------AYHEVDAYCSM------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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