>PF15427 (387 residues) NAPFSWGSLDEDGLDDSLLDLSEGEEDDGHFSFTEEDIQELLKDDDLSNEHFSWGGGLLK DNRHVEKGGKGNEILLDTSQEKNSLYSLGPVAETPGLLKLPQLSTSVGNGPTPTKPLNRH FALEKNLIKITVVAPFDPTVCDAVLDKDKTDSSKDTEKPSSLGEEMRKGGLSPNENKLCS ESEGISPSNSAWDAPPLSSPSDNDFEQTVSDKNMPDSKRPTPVFSQILDHSETPNTGSSW KNGSHKSNCEVRFPVVSSSSNKDVLDKDSGKLKVNERRLGKVIPVLQAKRRTNVPTFSQS DLEKQKESYLKEVIAHIEHPKDTNQGALGELYALMGQVHHMQNPKWQHPSDLTMRNYARF RQKPLQRYSLTQWVDRNMRTHHRFQRL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NAPFSWGSLDEDGLDDSLLDLSEGEEDDGHFSFTEEDIQELLKDDDLSNEHFSWGGGLLKDNRHVEKGGKGNEILLDTSQEKNSLYSLGPVAETPGLLKLPQLSTSVGNGPTPTKPLNRHFALEKNLIKITVVAPFDPTVCDAVLDKDKTDSSKDTEKPSSLGEEMRKGGLSPNENKLCSESEGISPSNSAWDAPPLSSPSDNDFEQTVSDKNMPDSKRPTPVFSQILDHSETPNTGSSWKNGSHKSNCEVRFPVVSSSSNKDVLDKDSGKLKVNERRLGKVIPVLQAKRRTNVPTFSQSDLEKQKESYLKEVIAHIEHPKDTNQGALGELYALMGQVHHMQNPKWQHPSDLTMRNYARFRQKPLQRYSLTQWVDRNMRTHHRFQRL | |||||||||||||||||||
1 | 2z67A | 0.06 | 0.05 | 0.72 | 0.55 | DisCoVER | --DVFRKIPE---NGIDDKICHGIGRSGNLVDPQP-KASGASIYALT------------------------NKILESF--------FKQLG------LNVHAIATPI-------------S-T---GSISLCLAAYGSNVVIYPYAS-HKSPIKAVSFVGNRLVETVGDRVYVPVIEAINRPCVLSTLTRNSDDIVEIAKICEIPHIINGAYKLKAFYRVDAVVSSGGLVYFIKEISLSYPGRASATPVVNTLVSL--------------------LSGSKNLVNQSKLLDDVESPIAS--CI--SV--NSDPVEIA-LLRVTGPRG--IK--KT--DHFGNCYLGTYTH-DY---IV---N-AAIGVRTEDI------NSVKLEK- | |||||||||||||
2 | 3crvA | 0.07 | 0.05 | 0.66 | 0.67 | DEthreader | -RPTGSGKTLFSL------------------------VR--THNEFYPIYRDL-FSFL---VEVKTDD--S---PLSLVKKCPYYSL-----------ALTYPYF---------F-ID--RYREFID--NELEERSLSITIQMAIKSRRILLLNQPKLSKEELEILADDYEDIRSVNKIH----GSILRFFSLLSIGFIPF-S-----Y---SKRLV-IKN----------------SYYLNLLNDNELSIILMS------REYMEKVWGIKRNML-YL----------------------------DVEREIKRVSG-----SYECYIA--VLVVFSYVESSSDLYLRSLISDVVIVGIPYPPALVTIKQAIGRAIRDVNDKCNKC | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.06 | 1.00 | 0.74 | CEthreader | IALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 4kvmA | 0.07 | 0.07 | 0.93 | 0.68 | EigenThreader | GLKAIEPLLERHPEHGESLAIKGILLHSLGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRADQAAKCYINAHKLEKNNSSLLRDLALLQSQLRQYKALADTRNALLQDNPGVRANWSALAVAQFLR---------GEYASAYKIVDAFESTINQGVPVDTQEESEAMLFMNLVILKKDGVEDAYKHLLSIEKKVLDRVAFLETRAEYELYLSKMEEAKSTIYLLLDRNPDNHQYYYNLQRAYGYEDA--------SGKVLDSQLAKRYPKSELEGDEFLTHVDLYLRKKLKRGIPSVFVDVKSLYKDLVSKYASSLSTTNKFSEDDLWTYYFLAQHFDHVG--ELEKAEKYVDLAIDHTPTLVELFMTKARISKHKG-------EL | |||||||||||||
5 | 3q73A1 | 0.18 | 0.04 | 0.23 | 0.31 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PMSQRSWADVKPIMQDDGPNPVVPIMYSEEYKDAMDYFRAIAAKEE--------KSERALELTEIIVR------MNPAHYTVWQYRFS---LLTSLNLERLMNEFAV-------- | |||||||||||||
6 | 5mv9A4 | 0.12 | 0.03 | 0.22 | 0.28 | MRFsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDPMADSIFHYYQELPKYLRGYHKCTREEVLQLGALIYRVKFEEDKSYFPSIPKLLRELVP--QDLIRQVSPDDWKRSIVAYFNKHA-- | |||||||||||||
7 | 5mqfT | 0.10 | 0.09 | 0.87 | 0.54 | FFAS-3D | ---------------------NSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRG--LLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAH-------LINQNVAHEVLCLEMLTLLLERPTDDSV------------EVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEI---DKRVQYMIEVMFAVRKDINLVSFRRTIYLAIQSSLDFEECAHKKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLKLSEETTTSSSRIFVKIFARLKDETLQRFAINFFLTDELREH------ | |||||||||||||
8 | 5h7iC | 0.13 | 0.12 | 0.91 | 1.05 | SPARKS-K | VPVIDLNRVSD---EEQLLPVRAILLQHDTFLLKKAVLDALLAGLTTKDLPDTSQGFDANFTGTLPLEDDVWLEQYIFDTDPQL--RFDRKCRNESLCSLFKLGLSVVSSAELTSHYATKLTRYFGVLTIFPCAKAIRYKPSTMATTDNSWVSIDEPDTGTLLARWSQ--------GMHTTS------------PLQIDPRANIVSLTI----WPSILRLQDAMKFVKELFTVCETVLSLNALSRSTGVPPELPQISSMMKRKIVQDDILKLAYVVELNSRGELTMNLPKRDNLTT---LTNKSRTLAFVERAESWYQQVIQRQKRYQQFLAMKMTQVFDILFSTETYLSSLIVDSLQDYRWNSLDKNRFSKLLQIHKSKQQD---- | |||||||||||||
9 | 2hpsA | 0.07 | 0.02 | 0.22 | 0.46 | CNFpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERAYHLRKMKTRMQRVDVTGD-GFISREDYELIAVRIAKIAKLSAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGE | |||||||||||||
10 | 6eqoA | 0.06 | 0.04 | 0.65 | 0.67 | DEthreader | SSLLAKALLKAGLEMTAAEELLAVADEE--L---I---A--------FIIYT-GVVHVHGGYASGVAATMATSYQSTTVITEGS-----IWGDVRDTDDVINVSGH------I--VIGAPH--------VTPIALTLVRTGA---------NPPVNASGSFVIAGMEALRLLLGALAGVDALADDNA------VRRDGVWARDPDT-GAPRFGHEIWLTGIPG--SS-RKDPEIA-C---RQWEADGE------------------------------------ERAFPRSFLAFMGYYGPGDEKGLEMVEAAR-L------------------MK-AR--------MVIV-QRFLQSLGLE---EGI-KLLRSPGNPRGV------ | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |