>PF15424 (264 residues) APLIPQRLMSASNSNELLLSLNNAQLQPLQLQGPFNSWIPPFSGILQQQQQAQIPGLSQF SLSALDRFAGLFPNQIPFPGQVSFVQGTQVGQQDPSQPQTPPQTQQGPNHVMPYVFSFKM PQEQAQMLQYYPVYMLLPWEQSQQTATQSPPQTGQQQFEEQMPFYTQFGYIPVQAEPVMP GGQQQLALDPLLGTAPETVVMPGGGVIPYLQKEVINFKHAKGGIFIPSTSQKPSTTNSFA PAIDPTITPELMEKKAKTDYLKEP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | APLIPQRLMSASNSNELLLSLNNAQLQPLQLQGPFNSWIPPFSGILQQQQQAQIPGLSQFSLSALDRFAGLFPNQIPFPGQVSFVQGTQVGQQDPSQPQTPPQTQQGPNHVMPYVFSFKMPQEQAQMLQYYPVYMLLPWEQSQQTATQSPPQTGQQQFEEQMPFYTQFGYIPVQAEPVMPGGQQQLALDPLLGTAPETVVMPGGGVIPYLQKEVINFKHAKGGIFIPSTSQKPSTTNSFAPAIDPTITPELMEKKAKTDYLKEP | |||||||||||||||||||
1 | 4tweA3 | 0.06 | 0.04 | 0.66 | 0.62 | DisCoVER | -LSFPPNVVDIVGPHSCHRTEDVVQPYAAYAPSGTP-QGLLV--YA-------N--RGAEDFKELQTLEGTIALTRYRGAKAVNAA--KH-GV----------------AGVLVYTDPADINDGL-SSPYLPPSGVERG-----SY----------YEYDPLGFPPIPTQPI-------------G-FQDARLCNLNGTLAWQ-GALGCHYRLGPGFRFPADSQVNVS------VYNRLELR------N--------------- | |||||||||||||
2 | 6g6oA | 0.07 | 0.06 | 0.88 | 0.66 | CEthreader | GTGQELVSLEGHQSAITALAFSKNIVVSGAADGTIKVW-DILTGQLLRDHDGHQSEVTALQ------FKDNIVVSGAKDGTVKVWYIGTGQELVSLEGHQSAITALAFSKNIVVSGAADGTIKVWDILTGQLLRDHDGHQSEVTALQFKDNIVVSGAKDGTVKVWYIGTGQELVSLEGHQSAITALAFSKNIVVSGAADGTQLLRDHDGHQSEVTALQFKDNIVVSGAK---DGTVKVWYI----------------------- | |||||||||||||
3 | 3ictA | 0.07 | 0.06 | 0.88 | 0.58 | EigenThreader | KKPRHATVIGGGFIGVEVENLRERGIEVTLVEANQVPPIDYEAAYVHEH---KNHDVSSLAKGAG----------LALGVRGTIKVNEKFQTSDPHGDAIEVKDFVTETETIPL-----AWPANRQGRLLGTSVAKVFDRLNIQANSHAGYYPNATDGVDKRDVIATAIKANLTVLDLPDLELSY---APPYSSAKDPVNVGYAASNIVDGDKDIYITCQLGRGYVAARLEKGYKVKNVDG----------GFKLYGTVLPERI | |||||||||||||
4 | 2wsc3 | 0.20 | 0.09 | 0.48 | 0.26 | HHpred | ---------------------------------------------------------------MLGAVGAIAPEILGKAGLIPQETALPW--FR-----T------GF--IYNYW--ADSYTFVFEMA-LMGFAEHRRFQD---W--AKPGSMGK------QYFLGLEKGLGGSGEPAYPGG---PFFNPLFGKDEK------------KLKEVKNGRLAMLGYFVQALVTVG------------------------------- | |||||||||||||
5 | 2pffB | 0.27 | 0.02 | 0.06 | 0.70 | MRFsearch | ------------------------------------------------------------------------------DDDYGFKQGGGGGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1d3e3 | 0.10 | 0.08 | 0.77 | 0.33 | FFAS-3D | ---LPVYVTPGSGQ---FMTTDDMQSPCALPW-------------YHPTKEIFIPGEVKNLIEMCQVDTLIPINSTQSNITVTLSPQTKLAEEIFAIKVDIASHPLATTLI----------GEIASYFTHWTLLAYTPPKEAMLGTHVVWDVGLQSTVSLVVPWISASQYRFTTPDTYSSAGYITCWYQTNFVVPPNT---PNTAEMLCFVSGCKDFC-----LRMARDTDLHKQTGPITQ----------------------- | |||||||||||||
7 | 5fvmC | 0.08 | 0.07 | 0.95 | 0.78 | SPARKS-K | -----VILASAGYDHTIRFEALTGVCRTIQHASQVNRLITSDKKYLAAAGHLHVSNNPN-PVSSFEGHKGNVTSIAFQQENRWMVSSSEDGTIKRSPSVQRNYKHNAP------VNEVAIHPNQGELISCDQDGNIRIWDLGENQCTNQLTPEDNTPLGSMLVAGNNKGNCMPHHTDASTLEPVTKFKSHTKYLSADVKNLADHTARVWNIEDQLETTLDGHQRWVWDCAFSADSAYLVTACSDHYVRLWDLSTSEIVRQYGGH | |||||||||||||
8 | 4pokA | 0.09 | 0.02 | 0.20 | 0.41 | CNFpred | -------------------------------------------------------------------------------------------------------------NVIFLEVDVDDCQDVASEVKCMPTFQFFKKGQKVGEFSGANKKKLEATINKLV------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 6s8bK | 0.06 | 0.04 | 0.75 | 0.67 | DEthreader | -------LWISSYLVS-LL--------P-NQFPPYP-GWKLIEGLRCYSE-R----------KREDGFWNLVCVLTELLLELTK--F-DK-------EKSKRGYEFVLPCPWVKLGAIEVLSMWQWFNKN---VRADS-DYLGDLLEGIVTPAHVSISSALNGLLVELEVYA-------EKLGNMCLESLPIVGRSY--EGKEIIRYRVMYNGYAKDVAIFRIL----------SIIDVIL-L--IVASDEKYLTEFLKDWKRK | |||||||||||||
10 | 5xxzA | 0.11 | 0.11 | 1.00 | 0.69 | MUSTER | IAKLGDHLPQTLGKTPIKLKLTDGNYQTKETLKDNLETQSDTGLVTNQAQLAVVHRNQPQSQLTKNQDFFISPNEDGFVAFKGLENNVYAKDDHQKQTPIWSSQAGAGASAIESTAWYGITARGSKVPGDYQYVVTYRDEHGKEHQKQYTISVNDKKPITQGRFDTINGVDPDKTKALGSSGIVREEVFYLAKKNGRKFDVTEGKDGITVSDNKVYIPKNPDGSYTISKRDGVTLSDYYDRAGNVSFATLRDLKAVGKDKLDLP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |