Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NLIPSKEFFFFGTEAVEPKALSHYLKSEKSAETAHSNIAWASETGKGLLFVGDKKNPSSVISLADATEPEIDGSHKFHLTSKGNKHTFKASSAAERDNWVAQLKLK |
1 | 5xpyA | 0.05 | 0.05 | 0.86 | 1.00 | DEthreader | | --ALDKAKTNFKYYSILPEFG--H----------GKREELIGIAYNRLIRMDATGDAIKTWRFSNMKQWNVNEIKMVTVEFAEVRLSFIC-TEVDCKVVHEFIGGI |
2 | 4wj7A | 0.11 | 0.08 | 0.75 | 1.00 | DEthreader | | -----------RLYIE----E-----------LTQEHDAVLSLSAYNVKLAWDGEDIILRVPIHDIAAVSYVRDHLVVLKTACCLVILAAESKVAAEELCCLLGQV |
3 | 3tfmA | 0.10 | 0.09 | 0.99 | 1.57 | HHpred | | -NSWKRRWCVLKDETFQEALKQGWLHNNGGGSRRNWKKRWFVLRQSKLMYFENDEKLKGTVEVRSAKEIIDNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQV |
4 | 3tfmA | 0.10 | 0.08 | 0.84 | 0.81 | DisCoVER | | LKQGWLHNNGGGSSTLSRRNW--KK-------------RWFVLRQSKLMYFENEEKLKGTVEVRSAKEIIDNTNNGIDIIMADRTFHLIAESPEDASQWFSVLS-- |
5 | 3tfmA | 0.10 | 0.09 | 0.97 | 0.33 | MRFsearch | | ---WKRRWCVLKDETFQEALKQGWLHNNSTLSRRNWKKRWFVLRQSKLMYFENDEKLKGTVEVRSAKEIIDNTENGIDIIMADRTFHLIAESPEDASQWFSVLSQV |
6 | 3tfmA2 | 0.11 | 0.09 | 0.82 | 1.82 | SPARKS-K | | ------------------PYFHSFLYMN-GGLMNSWKRRWCVLKDETFLWFANPQNAVGTLDVGLIDSVCADRPNSFVIITANRVLHCNADTPEEMHHWITLLQRS |
7 | 2lg1A | 0.21 | 0.20 | 0.96 | 0.58 | MAPalign | | ---QSLSLVKDVIGAVEKKVRLNEIYTFLKNAAGRLKEVQAVLLTDILVFLQEKYIFATVISLKKLI-VREVEEKGLFLISGPEMVEVHASSKEERNSWIQIIQDT |
8 | 2m38A | 0.12 | 0.12 | 1.00 | 0.41 | CEthreader | | AYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMVPTIILSVSAKGVKFIDATNKNIAEHEIRNISCAAQDDLSTFAYITKDYCHVFTAFDVNLAAEIILTLGQA |
9 | 2codA | 0.18 | 0.16 | 0.90 | 1.18 | MUSTER | | -----------GSSGSSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKESKGIIPLSAISTVRVQGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNA |
10 | 3tfmA | 0.09 | 0.09 | 1.00 | 1.39 | HHsearch | | MNSWKRRWCVLKDETFQEALKQGWLHNNGGGSRRNWKKRWFVLRQSKLMYFENDEKLKGTVEVRSAKEIIDNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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