Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QKGILYQKPKKHAVFSKYYIVLIPGFLILFNCFHRSTTGFAKNVIDYNHYLTIPISECYLYSGTTTELDLLRRDHTFDIINPGNHAIPRAYDDGWKSTENESSRCFTLWFGTKRAIAKYSKMQEHKAEHAEESVTDSDGEYVKNKNYESNPGTLRLVNRLGVSGRSMVFMARSRQERDLWVVSIYNEL |
1 | 2y7bA | 0.13 | 0.09 | 0.63 | 1.08 | SPARKS-K | | ERGFLTIFESGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPI--------GRINLANC--------------TSRQIEPANRE--------------FCARRN-TFELITVRPQ-------------------------------REDDRETLVSQCRD-TLCVTKNWLSADTKEERDLWMQKLNQVL |
2 | 1b55A | 0.12 | 0.07 | 0.62 | 1.23 | CNFpred | | LESIFLKRSQQPLNFKKRLFLLTVHKLSYYEYDFE-------RGRRGSKKGSIDVEKITCVETVV-----------PEKNPPPERQIPRR-MEQISII-ERFPYPFQVVYD----------------------------------------------------EGPLYVFSPTEELRKRWIHQLKNVI |
3 | 3dx4A | 0.03 | 0.02 | 0.70 | 0.67 | DEthreader | | DPGWAEI-I--NGQEFVGWVMPSHWNVQEGWLKQFM-------NVTP--------SPTMPMLI--Q--RT--HYSVKKELAQQR-QLEFLWRALFTHYVLLPTLQ---DFF-YKRDRVMHYVRAAELSARIEERL-----E--QA-R---RELSFQHDTTYYYP-----------------TTLTFAY |
4 | 2y7bA | 0.16 | 0.10 | 0.63 | 0.74 | CEthreader | | ERGFLTIFESGFGAWHRRWCVLSGNCISYWTY--------PDDEKRKNPIGRINLANCTSRQIEPANRE-----------------------------FCARRNTFELITVRPQREDDR--------------------------------ETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVL |
5 | 1ygaA | 0.09 | 0.07 | 0.83 | 0.65 | EigenThreader | | YGVITIGDE----KKFQATIAPLGATLVDLKVN------------GQSVVQMG----ATVGRYANS------SISSLNLQPNPNEFPGDLEVAEMVRGDATPINMTNHSYFNKSIRGTEVKVCSNKIIERNIATFDSTKFIIDANKDLKTTDHLYTGDFVPRSGFAVQQGRYVDEWRGCVL------L |
6 | 6bbpA3 | 0.14 | 0.09 | 0.60 | 0.96 | HHpred | | REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDK-----------EPRGIIPLENLSIREVE----------------------------------DPRKPNCFELYNPSHKGQVIKACKT------------------------------EADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI |
7 | 2pz1A2 | 0.15 | 0.08 | 0.54 | 0.27 | MRFsearch | | --GELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLL-------RRDVLYYKGRLDMDGLEVVDLEDGKDRDLH---------------------------VSIKNAFRLHRGA--------------------------------------------------TGDSHLLCTRKPEQKQRWLKAFARER |
8 | 3tfmA | 0.11 | 0.11 | 0.94 | 0.79 | FFAS-3D | | -HSFLYMNGGLMNSWKRRWCVLKDETFLWFWLHNNGGGSSTLSRRNWKKRWFV-LRQSKLMSEEKLKGTVEVRSAKEIIDNTNKENGIDIIMADHLIAESPEDA--SQWFSVLSQVHSSTDQEIREMHDEQANPQNAVGDSVCASDSPDRPNSFVIIT----ANRVLHCNADTPEEMHHWITLLQ--- |
9 | 1v88A | 0.16 | 0.10 | 0.61 | 1.05 | SPARKS-K | | MADWLKIRGTLKS-WTKLWCVLKPGVLLIYK---TQKNGQ--------WVGTVLLNAC-----------------EIIERPSKKDGF-----------------CFKLFH-------------------------PLEQSIWAVKGPKGEAVGSITQPLPSSY---LIIRATSESDGRCWMDALELAL |
10 | 1btkA | 0.09 | 0.05 | 0.60 | 1.21 | CNFpred | | LESIFLKRSQQPLNFKKCLFLLTVHKLSYYEYDFE-------RGRRGSKKGSIDVEKITCVETVV--------------PEKNPPPERQI--EQISII-ERFPYPFQVVYD----------------------------------------------------EGPLYVFSPTEELRKRWIHQLKNVI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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