>PF15404 (188 residues) QKGILYQKPKKHAVFSKYYIVLIPGFLILFNCFHRSTTGFAKNVIDYNHYLTIPISECYL YSGTTTELDLLRRDHTFDIINPGNHAIPRAYDDGWKSTENESSRCFTLWFGTKRAIAKYS KMQEHKAEHAEESVTDSDGEYVKNKNYESNPGTLRLVNRLGVSGRSMVFMARSRQERDLW VVSIYNEL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | QKGILYQKPKKHAVFSKYYIVLIPGFLILFNCFHRSTTGFAKNVIDYNHYLTIPISECYLYSGTTTELDLLRRDHTFDIINPGNHAIPRAYDDGWKSTENESSRCFTLWFGTKRAIAKYSKMQEHKAEHAEESVTDSDGEYVKNKNYESNPGTLRLVNRLGVSGRSMVFMARSRQERDLWVVSIYNEL | |||||||||||||||||||
1 | 2y7bA | 0.13 | 0.09 | 0.63 | 1.08 | SPARKS-K | ERGFLTIFESGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPI--------GRINLANC--------------TSRQIEPANRE--------------FCARRN-TFELITVRPQ-------------------------------REDDRETLVSQCRD-TLCVTKNWLSADTKEERDLWMQKLNQVL | |||||||||||||
2 | 1b55A | 0.12 | 0.07 | 0.62 | 1.23 | CNFpred | LESIFLKRSQQPLNFKKRLFLLTVHKLSYYEYDFE-------RGRRGSKKGSIDVEKITCVETVV-----------PEKNPPPERQIPRR-MEQISII-ERFPYPFQVVYD----------------------------------------------------EGPLYVFSPTEELRKRWIHQLKNVI | |||||||||||||
3 | 3dx4A | 0.03 | 0.02 | 0.70 | 0.67 | DEthreader | DPGWAEI-I--NGQEFVGWVMPSHWNVQEGWLKQFM-------NVTP--------SPTMPMLI--Q--RT--HYSVKKELAQQR-QLEFLWRALFTHYVLLPTLQ---DFF-YKRDRVMHYVRAAELSARIEERL-----E--QA-R---RELSFQHDTTYYYP-----------------TTLTFAY | |||||||||||||
4 | 2y7bA | 0.16 | 0.10 | 0.63 | 0.74 | CEthreader | ERGFLTIFESGFGAWHRRWCVLSGNCISYWTY--------PDDEKRKNPIGRINLANCTSRQIEPANRE-----------------------------FCARRNTFELITVRPQREDDR--------------------------------ETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVL | |||||||||||||
5 | 1ygaA | 0.09 | 0.07 | 0.83 | 0.65 | EigenThreader | YGVITIGDE----KKFQATIAPLGATLVDLKVN------------GQSVVQMG----ATVGRYANS------SISSLNLQPNPNEFPGDLEVAEMVRGDATPINMTNHSYFNKSIRGTEVKVCSNKIIERNIATFDSTKFIIDANKDLKTTDHLYTGDFVPRSGFAVQQGRYVDEWRGCVL------L | |||||||||||||
6 | 6bbpA3 | 0.14 | 0.09 | 0.60 | 0.96 | HHpred | REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDK-----------EPRGIIPLENLSIREVE----------------------------------DPRKPNCFELYNPSHKGQVIKACKT------------------------------EADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI | |||||||||||||
7 | 2pz1A2 | 0.15 | 0.08 | 0.54 | 0.27 | MRFsearch | --GELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLL-------RRDVLYYKGRLDMDGLEVVDLEDGKDRDLH---------------------------VSIKNAFRLHRGA--------------------------------------------------TGDSHLLCTRKPEQKQRWLKAFARER | |||||||||||||
8 | 3tfmA | 0.11 | 0.11 | 0.94 | 0.79 | FFAS-3D | -HSFLYMNGGLMNSWKRRWCVLKDETFLWFWLHNNGGGSSTLSRRNWKKRWFV-LRQSKLMSEEKLKGTVEVRSAKEIIDNTNKENGIDIIMADHLIAESPEDA--SQWFSVLSQVHSSTDQEIREMHDEQANPQNAVGDSVCASDSPDRPNSFVIIT----ANRVLHCNADTPEEMHHWITLLQ--- | |||||||||||||
9 | 1v88A | 0.16 | 0.10 | 0.61 | 1.05 | SPARKS-K | MADWLKIRGTLKS-WTKLWCVLKPGVLLIYK---TQKNGQ--------WVGTVLLNAC-----------------EIIERPSKKDGF-----------------CFKLFH-------------------------PLEQSIWAVKGPKGEAVGSITQPLPSSY---LIIRATSESDGRCWMDALELAL | |||||||||||||
10 | 1btkA | 0.09 | 0.05 | 0.60 | 1.21 | CNFpred | LESIFLKRSQQPLNFKKCLFLLTVHKLSYYEYDFE-------RGRRGSKKGSIDVEKITCVETVV--------------PEKNPPPERQI--EQISII-ERFPYPFQVVYD----------------------------------------------------EGPLYVFSPTEELRKRWIHQLKNVI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |