Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SIIPNNIRHKFGSTVVDQLVSEEQARRAIGEVFEGQKRTSSWSSRTQSPVKISSIFSDYYDLGYNMRSNFFRGPPQETKSLMQASYTPEVIEKSVRDIEHWHGRKTDDLGRWHQKNAMNMNLQKALDEKYGEKSKSR |
1 | 5bymA | 0.05 | 0.04 | 0.66 | 0.68 | DisCoVER | | LILDPF--------------GNYLVQKLCTLLI--QTIYPNVFQISINQYGTRSLQKIIDTVQILIIKGFSQEFT--SIEQVVTLI-----------ND-LNGNHVIQKCIFKFGFIIDAI---------------- |
2 | 4lmoA | 0.08 | 0.07 | 0.78 | 0.83 | DEthreader | | ------------FLYGGSFLL-NR--K--KK--TAEGF---RKI-RQHCCAIPQEWEHRLLYFARVRFFRLSVAELMWKIK--VNNCDWLKIS-VP-SE---SYRTQILGQFLAWLLGFVVGLVRACFYQEWAKLQD |
3 | 3i04A | 0.06 | 0.06 | 1.00 | 0.44 | CEthreader | | CSAQAAGKLGLLDPANVETYCGDGLKGFLKRLGEGANIEDNSRAVDLLMAMANDLGVDTPKVPFVASAPEAMGVPTHVGTMPPVEGSDLIYSILTQIASDVYGGYFQVAARKILDALEYRTWKLGVHKEVAERYETK |
4 | 6nuwG | 0.07 | 0.07 | 1.00 | 0.47 | EigenThreader | | TALLSSDDYLMDDKAQVIEKRKDAMSRGKQDLLSKEIYDNESELRASQSQQIMELVGDIPKYSLGSELRNRVEGEPQSTSIERLIEDVEYSNLRKDLILKCQALQIGESKLSDILSQTNSINSLISEYFATYNGKLV |
5 | 5svdA2 | 0.11 | 0.09 | 0.77 | 0.30 | HHpred | | --LIQMCYHGVFSHVVEHVLQTIIKRKMLLNILSKESVNACYGSHMDKLWEFTAKTLYKERIARALVLET--------EKVKNSIYGRQVWKNWKL--ELYV-RKMWDWKKLIKEQEF------------------- |
6 | 3bwtA3 | 0.15 | 0.09 | 0.61 | 0.35 | MRFsearch | | --AIELSIHKFGSNVIEKILKTAIVSEPMILEILNNG------------------------------------GETGIQSLLNDSYGNYVLQTALD-------------ISHKQNDYLYKRLSEIVAPLLVGPIR-- |
7 | 3qavA2 | 0.09 | 0.08 | 0.93 | 0.50 | FFAS-3D | | -LFPSDTTIR---AKVYQRMFESNISTNVMEFVQYKMKNKDSIDQVLLKEKKDKAHVELGHWENYLKQTFVAT---KEFTMADVFFFPMVALIVRQGAN--LKDSYPNIFKYYNMMMDRPTIVKTMPPHWAESDSPG |
8 | 6yvuB | 0.09 | 0.09 | 1.00 | 0.65 | SPARKS-K | | LEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEI |
9 | 3k49A | 0.12 | 0.09 | 0.73 | 0.54 | CNFpred | | --IYHLSTHSYGCRVIQRLLGSSEDQESILNEL----------------------KDFIPYLINYVIQYVLQQDQFTNKEMVD--IKQEIIETVA-----------NNVVEYSKHKFASNVVEKSILYGSKNQKDLI |
10 | 2w6dA | 0.04 | 0.04 | 0.98 | 1.00 | DEthreader | | VAGVFRYLTLLQKGIEL--FLRERAIAELRQVRTLARLCNRVARRIPLLEQDVNELKK-RIDSVEPEFNKLGIREFEIAFKLSGLAGFDWKNILNYFTVIGGQQVVYNVKECFDSYERVSKRINDDIVSRKSELDNL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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