Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | LRNRRTSLQELRSHENFLTRLNGELVRNIQDMEDSAAQKVRAMLQQQDIFATVMDILEYSNNKKLQQMKCELQEWQEKEEAKMRHLERQVEQLNARIHKTKEEVSFLSTYMDHEYPVRSVQIASLARQLQQVKDSQQDELDDLNEMRRKVLESLSNKIQKKKRKLLRSLVVKTQSPYEEALLQKTRDSQDILKCTGRFREFIKHFEEEIPILRAEVQQLQVQLQEPRDIIFADVLLRRPKCTPDMDVILNIPVEELLP |
1 | 5xg2A | 0.14 | 0.12 | 0.84 | 1.37 | FFAS-3D | | ----KGAIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEEGEARIKRAEEEKERLKAEIEARLPGLRERAENLRRLVEEKRAEISELER------RLSSIQSFELRIKLSDLEKELELARKDLEKV-LAEERAVREEIEVAKRRINE--LDTLIERERGELAKLRGRIERLERKRDKLKKEARELTEKIRAVEKEIAALREELSRVEGKL---------------------------- |
2 | 4tqlA | 0.15 | 0.13 | 0.86 | 1.06 | SPARKS-K | | ---YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKLLEKIKKNI-DDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG-------------------------------- |
3 | 5nnvA | 0.10 | 0.08 | 0.79 | 0.72 | DisCoVER | | SSAISAKEAKIEDTRDKI-QALDESVDELQQVLLVTS-EELEKL---EGRKEVLKERKKNAQEQLEEAIVQFQQKETVL---KEELSKQEAVFETLQAEVKQLRAQVKEK-QQLSNELTELKIAAAKKEQACKGEEDNLLKKELTETELALKEADSFLT-SE-SSSTSGEEKLEE-AAKHKLNDKTKTIARRDQRIKLQHGLDTYERELKEKYKQ------------------------------------------- |
4 | 2j69A | 0.04 | 0.03 | 0.82 | 0.83 | DEthreader | | TESLYVNNCRGLTVERAIAELRQVRTLARLACNHTREAVR--EEFNLTGIRDEFQKEIINTRDTQARTI--S---------------------D--LR-YQ--P-EL-NLFDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAFKELSRSASQYGASYNQITDQITEKLDVEDNSPGWAKWAGLLSAGFD-WKNILLNYFTVIGIGGIIAV-GIQVHEQSQVV-------------YNAVKECDSYREVS |
5 | 5xg2A | 0.09 | 0.08 | 0.85 | 0.54 | CEthreader | | AIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALPEARELTEKIRAVEKEIAALREELSRVEGKLEGL--------------------------------------- |
6 | 4cgkA | 0.08 | 0.07 | 0.81 | 0.65 | EigenThreader | | ---------------------------------------------SQQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASATWGVKTLAYWGNGAQWATSAAAAGFRPQVGAIACWNDGG---YGH |
7 | 6f1tX | 0.16 | 0.12 | 0.73 | 0.54 | HHpred | | ----------------------------IRQKEKLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQEL-------SEQNQRLLDQLSRASEVE-RQLSMQVHALKED----FREKNSSTNQH-----IIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLIL------------------------- |
8 | 2tmaA | 0.11 | 0.10 | 0.88 | 0.47 | MRFsearch | | --NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAAEADVASLNRRIQLVEEEAQERLATALQKLEEAEKAADESERGMKVIESR----AQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKDLERAEERAELSEGKCAELTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYA-------------------------- |
9 | 2tmaA | 0.08 | 0.08 | 0.95 | 1.31 | FFAS-3D | | AEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADSLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIAEERAELSEGKCAELEEEIKTKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKY-KAISEELDHALNDMT------------ |
10 | 6yvuA | 0.12 | 0.12 | 1.00 | 0.95 | SPARKS-K | | LRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKHKSKLENKENGLLNEISRLKTSLSIKVENLNTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQTC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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