>PF15397 (258 residues) LRNRRTSLQELRSHENFLTRLNGELVRNIQDMEDSAAQKVRAMLQQQDIFATVMDILEYS NNKKLQQMKCELQEWQEKEEAKMRHLERQVEQLNARIHKTKEEVSFLSTYMDHEYPVRSV QIASLARQLQQVKDSQQDELDDLNEMRRKVLESLSNKIQKKKRKLLRSLVVKTQSPYEEA LLQKTRDSQDILKCTGRFREFIKHFEEEIPILRAEVQQLQVQLQEPRDIIFADVLLRRPK CTPDMDVILNIPVEELLP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LRNRRTSLQELRSHENFLTRLNGELVRNIQDMEDSAAQKVRAMLQQQDIFATVMDILEYSNNKKLQQMKCELQEWQEKEEAKMRHLERQVEQLNARIHKTKEEVSFLSTYMDHEYPVRSVQIASLARQLQQVKDSQQDELDDLNEMRRKVLESLSNKIQKKKRKLLRSLVVKTQSPYEEALLQKTRDSQDILKCTGRFREFIKHFEEEIPILRAEVQQLQVQLQEPRDIIFADVLLRRPKCTPDMDVILNIPVEELLP | |||||||||||||||||||
1 | 5xg2A | 0.14 | 0.12 | 0.84 | 1.37 | FFAS-3D | ----KGAIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEEGEARIKRAEEEKERLKAEIEARLPGLRERAENLRRLVEEKRAEISELER------RLSSIQSFELRIKLSDLEKELELARKDLEKV-LAEERAVREEIEVAKRRINE--LDTLIERERGELAKLRGRIERLERKRDKLKKEARELTEKIRAVEKEIAALREELSRVEGKL---------------------------- | |||||||||||||
2 | 4tqlA | 0.15 | 0.13 | 0.86 | 1.06 | SPARKS-K | ---YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKLLEKIKKNI-DDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG-------------------------------- | |||||||||||||
3 | 5nnvA | 0.10 | 0.08 | 0.79 | 0.72 | DisCoVER | SSAISAKEAKIEDTRDKI-QALDESVDELQQVLLVTS-EELEKL---EGRKEVLKERKKNAQEQLEEAIVQFQQKETVL---KEELSKQEAVFETLQAEVKQLRAQVKEK-QQLSNELTELKIAAAKKEQACKGEEDNLLKKELTETELALKEADSFLT-SE-SSSTSGEEKLEE-AAKHKLNDKTKTIARRDQRIKLQHGLDTYERELKEKYKQ------------------------------------------- | |||||||||||||
4 | 2j69A | 0.04 | 0.03 | 0.82 | 0.83 | DEthreader | TESLYVNNCRGLTVERAIAELRQVRTLARLACNHTREAVR--EEFNLTGIRDEFQKEIINTRDTQARTI--S---------------------D--LR-YQ--P-EL-NLFDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAFKELSRSASQYGASYNQITDQITEKLDVEDNSPGWAKWAGLLSAGFD-WKNILLNYFTVIGIGGIIAV-GIQVHEQSQVV-------------YNAVKECDSYREVS | |||||||||||||
5 | 5xg2A | 0.09 | 0.08 | 0.85 | 0.54 | CEthreader | AIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALPEARELTEKIRAVEKEIAALREELSRVEGKLEGL--------------------------------------- | |||||||||||||
6 | 4cgkA | 0.08 | 0.07 | 0.81 | 0.65 | EigenThreader | ---------------------------------------------SQQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASATWGVKTLAYWGNGAQWATSAAAAGFRPQVGAIACWNDGG---YGH | |||||||||||||
7 | 6f1tX | 0.16 | 0.12 | 0.73 | 0.54 | HHpred | ----------------------------IRQKEKLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQEL-------SEQNQRLLDQLSRASEVE-RQLSMQVHALKED----FREKNSSTNQH-----IIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLIL------------------------- | |||||||||||||
8 | 2tmaA | 0.11 | 0.10 | 0.88 | 0.47 | MRFsearch | --NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAAEADVASLNRRIQLVEEEAQERLATALQKLEEAEKAADESERGMKVIESR----AQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKDLERAEERAELSEGKCAELTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYA-------------------------- | |||||||||||||
9 | 2tmaA | 0.08 | 0.08 | 0.95 | 1.31 | FFAS-3D | AEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADSLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIAEERAELSEGKCAELEEEIKTKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKY-KAISEELDHALNDMT------------ | |||||||||||||
10 | 6yvuA | 0.12 | 0.12 | 1.00 | 0.95 | SPARKS-K | LRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKHKSKLENKENGLLNEISRLKTSLSIKVENLNTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQTC | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |