>PF15396 (218 residues) FNFHKPKVYRSATGCCICKAKSSSSRFTDSKKYEDDFLECFQLQERRTGEICNACVLLVK RWKKLPAGSNRNWRHVVDARAGPGIKSLTKYKSRNKKKVKDKPEKIEKIVKKKYVYSKTE ADREHSPAMSDELTEYYSIAEVGSKSSSRSESPADSDDIAEKQIDVPPVENMEVEQSYIN DFIDLSYFKREIICCGTIFKGPYGEVIVDPSLLKPCVG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FNFHKPKVYRSATGCCICKAKSSSSRFTDSKKYEDDFLECFQLQERRTGEICNACVLLVKRWKKLPAGSNRNWRHVVDARAGPGIKSLTKYKSRNKKKVKDKPEKIEKIVKKKYVYSKTEADREHSPAMSDELTEYYSIAEVGSKSSSRSESPADSDDIAEKQIDVPPVENMEVEQSYINDFIDLSYFKREIICCGTIFKGPYGEVIVDPSLLKPCVG | |||||||||||||||||||
1 | 4zrcA | 0.06 | 0.04 | 0.74 | 0.74 | DisCoVER | PVRTIAGALQVEDVILGHCYDRRCGSGL-Q--AVIQACLQVRSGDHDLVVAGGAESMS--GM-AVRSHQRAPSSGQNDAASMC--IV-TTKAVRLVSWGS----------------A-GVAPDLMGIGPVPATEVALLADIDLIELNEAFAAQALAVMR---EWERT---NVRG-SGISL-GH---------PVGATG---------G----RMLAT- | |||||||||||||
2 | 1xkwA | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | PIDHERLLFSL---DEAMQQAT--GVTVQAYYVGFKVDSFEPLLGNSSPQDMYERVEILR-GS-NGLLHG--ATVNLVRKRSTTLS-------------------AE--VDVG--G--PLGNVRGRAVYGVT-GAQY----QHIDT--AF-SSAEYRSLDANLNGLGAGGRESTYQVEGKTELAAFQGFELEGTGSAGYTYTSRHLLRLWSNY----- | |||||||||||||
3 | 6p2mA | 0.07 | 0.07 | 0.97 | 0.64 | CEthreader | TGVMAMKAEIASGYLYVTFANSPGPNNATAGSVWRYTISNGEWKDISPAKGSYGYCGISV------DPRNPNHILVATLDLWWPRDQIWRTTDGGSTWTPLLWNPSNNAVIAKFDTSSAPWAAIRNPHWITDIKIDPFNSNKAMFVTGYGIWACDNLSASPTTWYFRNKGLEEMVPIEIVSPPSGALLLSAMGDQGVFRHDSLDASPSMGVALDVGTA | |||||||||||||
4 | 5d98C | 0.08 | 0.07 | 0.94 | 0.58 | EigenThreader | EQSATALFSRKERSLEWITIGGG--INEDRKRLLAMCMIFCRKMGSSMGIVTIQSGKIDMPEDVSFQHPDLA-------VLRDEKTAITKGYEALIKRLGNDIPSLIAKKLYNLPEVKLMAPLIRKGVYSRVARKLVSTQVTTGHYSLHELIKVLPFTYFAPKQGMFEGRLFFSNDSFVEPGVNNNVFSWSKA--DSSKIYCHG-IAITSLALLEGFS | |||||||||||||
5 | 2yxlA | 0.15 | 0.12 | 0.79 | 0.39 | HHpred | ---------------------------ANVEEVIGELEE-DGVE-VVRSERVPTILKIKGPFDTSSADPKP-GETVVDLAAAPGGKTTHLAELKNKGKIDVDKMRMKRLKDFVKRMIKIVKPL-VKDARKAPGEEVADKLDA-PCTSGKNPELRLREDKSQSAARLKPCSFKEENEKNIRWFVPLKSYD-----PG----FLEGTMRAWPHRHS---- | |||||||||||||
6 | 1pzwA | 0.21 | 0.06 | 0.27 | 0.80 | MRFsearch | --------------CRLCLRGVS------ESKVAEVLRQHFWFEDEISKVICNVCWTQVSE-----------------------------------------FHQFYVSIQEAQVIYAT--------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6agbB | 0.10 | 0.08 | 0.75 | 0.30 | FFAS-3D | -------------------SKLNVDQFISSRQFEKQLQLAMHNSKAASSTRI---------FQALPRKLRRRTSH--NVRRIPKMRNRALREMRKSDAHGLNAKQLYKARMSIKLLRLASKSTSMKLSMPPEVTSKESSTANPNIKLLNNRMGSYDCTGVNELAPIPKGRVKYTKRQKHFAWLPTHIWNAKRS------------------------- | |||||||||||||
8 | 6thhC1 | 0.13 | 0.11 | 0.89 | 0.99 | SPARKS-K | DEEGKVKQINAFLPTKVCKPFEDVVGNLDNKSKLQVAREVIERNRK---DIPFGLLIYFNKFSKNEEDYIRK---------GLGINEKSLKYLLNIGDVQKALDKILELLEKRYAEQSSDKTLLYYVKFSSSGNIIDDLPKITDRPNDYCPIYSSN---------PVRFVQVRDDWKVCPICIYEANLKDKPPYFIVTF---YPGVPISLLNIIDFDF | |||||||||||||
9 | 4v3dA | 0.19 | 0.04 | 0.22 | 0.51 | CNFpred | ----------------------------DTIKWETELTYCINNTDVTDCNKCNKNCVCFDKWVKQK---EDEWTNIMK-------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5ganA | 0.04 | 0.04 | 0.82 | 0.83 | DEthreader | QNISPVY-DQWYDFIKPEMAEKIDFLLNRLLRLIV-----------KFASFIFYGLVIDLLLGQERTDLANFMYTRYLDRI-NSMCGFEVSLFEAIVAT--L--VASHIKLIPVIQALGGITILETLFKGGIIFLWQKIHESTHPRYAVLRIKLIYQ-----KR------SSKNEWSVKIQVAAVPQIIPIGTEGLELLWIHTTGNF----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |