Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GCTSAKQVSAVPNDEEGRGKAYSNGDLYADEYKMKGVEEVKYMRGEENRVNARNQENLEKSHVQYRGKPQKEVAAANIKSNIHTSESQQEFFRMLDEKIEKGRDYCSEGE |
1 | 1a87A1 | 0.06 | 0.02 | 0.31 | 0.75 | DisCoVER | | ITPDNPGRYISSNPEYSLLAKLIDAEFHTRKGQY---------------------------------------------------------------------------- |
2 | 1lbqA | 0.14 | 0.12 | 0.83 | 0.83 | DEthreader | | ---------VLMNMGG----IRKWSEYQATEVCKIKTCHKPYAFSVIDR-WPTN-EGLIKAFSENTKKLLFMIPIAFSDSLNGNQTFIEGMADLVKSHLQSNQLY-F--- |
3 | 5jqmC | 0.04 | 0.04 | 1.00 | 0.52 | CEthreader | | NPANSTMKTYTRNLDKVEEYTTYQFDSATSSTIADSRVKFSSIKSKVEDWSRTKFDENVKKSRMGMAFVIQKLEEIMSASFAPECTDLKTKYDSCFNEWYSEKFLKGKSV |
4 | 5doqB2 | 0.03 | 0.03 | 1.00 | 0.48 | EigenThreader | | LLSVTSVLYISAVFLTYYARYALLWSGPTMLSAWMLVISFLFFVITVWALLFQYAFAFYAYGISHYPYLLYPYLTIYDGFTNETMAMALIVAFIAGLLLLIPSLYLLMRL |
5 | 1e09A | 0.09 | 0.08 | 0.86 | 0.23 | HHpred | | ----IKHSEILEGD----G---GPGTIKKITFGEGSKHKIDSIDKENYSYSYTLIEGDGDTLEKISYETKLVASGSGVEIKAGK-EKASNLFKLIETYLKGHPDAYN--- |
6 | 5xwpA1 | 0.26 | 0.15 | 0.56 | 0.52 | MRFsearch | | -----KTVKNN-------------------------KGEEKYVSGEVDKIYNENKKNEVKENLKFY-----------SYDFNDNKNEIEDFFANIDEAISSIR------- |
7 | 1ulyA2 | 0.19 | 0.15 | 0.75 | 0.37 | FFAS-3D | | --------------------------VITDPEVIKVADVFYYLGDEELRYIARSRLKTKIDIFKRLGYQFEENELLNIDRSQKEFDATVRISKYIEEKEDALKDFSNED- |
8 | 3hgfC | 0.12 | 0.09 | 0.75 | 1.03 | SPARKS-K | | -------------------KKIENIVTKIDKKKYIYKK-----LLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIK-KKSENMIKSMEKYIKDLDEIKE--QSPK |
9 | 5ijpA | 0.12 | 0.03 | 0.22 | 0.36 | CNFpred | | --------------------------------------------------------------------------------------DESRFVSKLEAELDKVHAKQQVKA |
10 | 6jsjA | 0.05 | 0.05 | 0.86 | 0.83 | DEthreader | | PSRVP---TKLDLVD-PEKARGQVSKLREKLIKILEI-SMSNALETSTLIQQELDDTSYLFKEFNDRHYNNVLGIKFQHTTLYTA-DQVENCIKPFKYEID--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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