>PF15388 (317 residues) MRRTMSLDAIIGPYLQGHWPKEPEGQSSLTRMDKSTQTPDSWSDKSQSRRGSGSHKRSAS WGSAEHLREIAKLKQQLQQRSKPAVSGGHDKDRQRGYPQESCSLGATQTQPIPIPLAPLS TLVPRLRCSVEGLNQELEGMFICQPPHPQHRLLDVPDGHRAPVPPHSCSSGSQSDPATTP LCSSSTSSSPCSLPNYTSTSPPHSEDVPLDVHQGLIDRAERRLLSPFSFQNETDHSLPLL ISSSPGPNKSCCFQREPPEGCEKVRVCEETSAPHQNKPTLISSCPDPNKVNFTPHGGSAF CPVSLLKPLLPSMDLLF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MRRTMSLDAIIGPYLQGHWPKEPEGQSSLTRMDKSTQTPDSWSDKSQSRRGSGSHKRSASWGSAEHLREIAKLKQQLQQRSKPAVSGGHDKDRQRGYPQESCSLGATQTQPIPIPLAPLSTLVPRLRCSVEGLNQELEGMFICQPPHPQHRLLDVPDGHRAPVPPHSCSSGSQSDPATTPLCSSSTSSSPCSLPNYTSTSPPHSEDVPLDVHQGLIDRAERRLLSPFSFQNETDHSLPLLISSSPGPNKSCCFQREPPEGCEKVRVCEETSAPHQNKPTLISSCPDPNKVNFTPHGGSAFCPVSLLKPLLPSMDLLF | |||||||||||||||||||
1 | 7bvcA | 0.04 | 0.03 | 0.85 | 0.78 | DisCoVER | ATAPLVAGAPRALTNPGIVSIDTITRVAEAYYRYFGVAVLVEADPNPNGVSYAAGTGGGYGPEGVNGSR-----------VFLPFGLDPSRTPVMGSYGENKLAAKATSAWYQLPPRTPDRPLVTVAAAGAI----WY--YEE------GSFNYG-QSLKLQWGVQPIDIFQQKAWRNLRFANVARIVADDPNLSEDQWFAFTPP-RVPVLQ-TAQQFL--GSQTPVLMD-NFPCQRPFAERLGVAELPEYRIIPNWQSAADGGPFLFIQALLRT---EAIPTYLRDDYRDGSIERYAIIRAL-------------- | |||||||||||||
2 | 2cqtA | 0.05 | 0.03 | 0.63 | 0.67 | DEthreader | ------PWINYLLLSHQ----------------YRYNADAGSWLPVK-ADLDHFE-ARHGSRITLFFEQ-FVEFCLNAQDQTNYRNSITEERRDHEN----------------WNLLTYSDRMV-------------------------NIWQQCTSRGMSDLFVHLIPERAR----RIIDI-----QPLTKRGVFHLRSFTQNRGLIAYDYNPVGTDKPEKYPAYTTYSTYPPGYENGGI--------FCHNN-----------------------PAYREDISDTKLEPYVY---WLTGAANFVAQY-------- | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.06 | 1.00 | 0.66 | CEthreader | MAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3jcrG | 0.06 | 0.05 | 0.89 | 0.68 | EigenThreader | WIASARLEEVQVARNLIMKGTEMEDVWLEA-------DTAKAVVAQAVRHVRIYIRAAELEAKKRVLRKAL---------ERLWKAAVPMLSRAVECCVELWLALARYENARKVLNKAWITAAKLEEQMVEKIIDRAIT----SREQWIQDAEECDRVATCQAVMTWMEDADSCVALECARAIYAYAK-----SVWLRAAYFEKNHSLE-----ALLQRAVAHLWLMGAKSKWVPAARSILALAFQEEIWLAAVKLESEERARRLLAKARSS------VFMKSVAAQDLCEEALRHKLWMMKGQIEEMEKAREAYNQ | |||||||||||||
5 | 3j38b | 0.20 | 0.04 | 0.19 | 0.26 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KHKLKRLVQHPNSYFMDVKCP--GCYRITTVSHAQ--------GVVVCAGCATILCQPTGGRAKCSFRR------------ | |||||||||||||
6 | 2pffB | 0.24 | 0.03 | 0.12 | 0.40 | MRFsearch | ------------------------------------------DDDYGFKQGGGGGQGSQEQGMGMDLYKTSKAAQDVWNR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 2xd8A | 0.11 | 0.10 | 0.91 | 0.55 | FFAS-3D | --KSLQFIYTSSFHTPGTPIKAPPVAEKTIVMDDLLISSAFVYDLDETLAHYELRGEISKKGYALAEKYDRLIFRSITRGARSASPV------------SATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAAAMDEKGVSSQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENA-------NATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVIYQGDLGRMAMGADYLNP--------- | |||||||||||||
8 | 4btgA3 | 0.12 | 0.11 | 0.93 | 1.35 | SPARKS-K | ARGLTQAFAI--GELKNQLSVGALQLPLQFTRFSASMTSELLWE-----AYVYRVGRTATYDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIDQNLALFIGRAEVIFSDEELSSTIIPWFPFKLRPINETTSYIGQTSAIDH--------MGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGLAPIGNTRGTVNGFPSVVERDYALDRDPMRTGIVDESLEAR-ASNDLKRSMFNYAVAHNP-----EVVVSEH--QGVAAEQGSLYLVWNVRRIPVGYNGGSTPEPLAYNKPIQPSEVLQA | |||||||||||||
9 | 4o9xA | 0.05 | 0.03 | 0.73 | 0.67 | DEthreader | DLGTPLNALPVEYTPRLALMLVLIVRQMADVGS-WLDEKAAALT-T----------------------G-QTPVCARGAFGYNWYGQLRSELPIGRILFTPFTVSVINTSNFTATPQVTEDTAGVTRQSSYTTDAKGNIQRLAYDVAQLNGSWLTLKGQTEQVIGNDVITTLQDLRIRNVMPER-MA-----TYTNYTRTY----GN---------------------QVDALFDNTNLNWLQQVTDREWY----------------INEQQAS----------QRVTYELRLQHWENNQLRYSIGKEYYGYP-D-- | |||||||||||||
10 | 2atyA | 0.09 | 0.09 | 0.97 | 0.82 | MUSTER | LIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDACKTNFSMNGNNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTMITDFFPEDITVEWQW---NGQPAENYKNTQPIMNTNESYFVYSK-----QKSNWEAGEGLHNHHTEKSLSHSPGK-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |