Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KNLSYNSSLPPFLAALRAQASGATGPDPILAAQRRGAKKRSGSEEAEDAPLVVDEHGNALEDLKVNKDGTVEEAVAAAANAEDDAEAEIKDAKSDAAKKSEAEPARASIGGRKRKVGKVVGEEAQDGAAETAAAGKKPETSKKETDDAEETSNRKPKKKAKKIKLSFDEDE |
1 | 5lvyA | 0.08 | 0.05 | 0.57 | 0.72 | DisCoVER | | SLSIFLDCKAL--G--G--TV-----YFW-GA--D----------TR-DGKLVMKKKYTLMTTYG--GY-G-----------------YYHVSQKT------PPQTISGVVGQYTVELTGFFSLN----------DNKQANP--------TPSLKKNIVSSTGTITI---- |
2 | 1v4yA | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | | -----FIDSHTHDDNYLLKHRD---LALHANPPAD-DEGGSFRFARFSY-----------VGHSTLRAAVIQAMQADDRPLITHGGVY-ATVVISHHKAYPYVAGSTLITWCSAGAGLPRLWGTFPRVLLTAVWKGLTKFLAERGDLVVF-PVADSATFEHPT-------- |
3 | 2zylA2 | 0.09 | 0.09 | 1.00 | 0.46 | CEthreader | | VWHDHEGNPPDPAVRIPEIPEAASDEWTDWRWNRILIEFFYIHFGLPTYFKNVFEGHIASQYLHNVGYGEAHLDSEASYFGPSFMINWLHNRYGNYKSESILINCHYPVTQNSFVLQWGVIVEKPKGMSMTDKLSRVFTEGVSKGFLQDVEIWKHKTRIDNPLLVEEDGAV |
4 | 5chxA | 0.06 | 0.05 | 0.88 | 0.57 | EigenThreader | | GERWETLESGHSESEISQEADDMAMEGY--VGELRALLSGAG----DVYTFNFS---ESCYFFFENLDVSLGSFNLEVIRELICYCLDTTAENQANEHHLRVVDSLQTS----LDAETRSRNEALRVM--EGDLNEMEIQLSHANRMAAEAQQVSLQSLLD-----TQIQL |
5 | 2lduA | 0.22 | 0.06 | 0.29 | 0.27 | HHpred | | -HMAGPSNVPAFLTKLWTLVSDPDT----------------------DALICWSPSGNSFDQGQFAKEVLPK--------------------------------------------------------------------------------------------------- |
6 | 5ue0A | 0.21 | 0.08 | 0.36 | 0.53 | MRFsearch | | ------------LTAMSDQLVGADGELPAEIQ-------------------------------------AIKDALAQALKQADGLATAMGQVAFAAAVGGGSAGTAGTVQ------------------------------------------------------------- |
7 | 5x6oG | 0.07 | 0.07 | 0.95 | 0.35 | FFAS-3D | | ------GTRPPRFTQIPPSSAATQIPTTLEVTTTTLNNKQSKNDNQVNQ--LNKAQGESMLRDNIEREKEKNIQAVKVNELVKHLQELAKLKQELQKLEDEKKFLQRGKSKREVITNVKPPSTTLNTITPDSSSVAIEAKPQSPQSKKRKISDNLLKKNMVPLNRIIPDE- |
8 | 2xnxM | 0.13 | 0.08 | 0.63 | 1.15 | SPARKS-K | | ----------------------------------------------------------RLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLE-----KELEAITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQIS- |
9 | 3fzyA | 0.16 | 0.04 | 0.22 | 0.44 | CNFpred | | ----------GFGHQFINAMDANGLRVDVSVR----------------SELAVDEAGRKHTKDA----------------------------------------------------------------------------------------------------------- |
10 | 5t8vA | 0.07 | 0.06 | 0.82 | 0.83 | DEthreader | | NAFASAMICFLRRLVQTSAG-LLP-WPAAELLLRLLMLMMGLVENDKS-ILNSMLLILRSSS-----------DSST-VRTNRFSDRNGLLHVARIVLDKLFAKAEASFTFVLPQLDA--EFLVEVLASINRLVHETGVTFITAFLHLMEFEYVKVQG------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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