>PF15373 (439 residues) LFPTDPRWDREERVSEARRAFPPPSTPPWELLQAQARERTLAMRASNLHLHEDAHAGIGL SNARAAYGWPDLPARARERIRGARLIFDRDSLPPGDRDKLRIPPTTHQALFPPHDARPQP RAPSRHLGGPNTLKWDYTRQDGTSYQRQFQALPGPPALMCKRASSRVELGDCKISYGSMC SEQKQAYKPQGLPEDRYDKAQAAAHIHYVNIRPGDGLFHNRTTKAEHFYAREPEPFVLHH DQTPESHILKGNWCPGPGSLETFMQYFYGQPPPATQPPSRHVPHEKLQSHVILGEPKLLK RFFKTTMGSDYCPSEWRQVQKAPNLHLQQSNLPQGTGEFDFLTMNQKMLKPHGTAPALVT EEMLQRCKYSHMEPPLGGLRFFSTQYKDEFPFKYQGPAALRLKNPQEGFVPLGTPHQHGC REKTDPRAPQPPMYPCPSQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LFPTDPRWDREERVSEARRAFPPPSTPPWELLQAQARERTLAMRASNLHLHEDAHAGIGLSNARAAYGWPDLPARARERIRGARLIFDRDSLPPGDRDKLRIPPTTHQALFPPHDARPQPRAPSRHLGGPNTLKWDYTRQDGTSYQRQFQALPGPPALMCKRASSRVELGDCKISYGSMCSEQKQAYKPQGLPEDRYDKAQAAAHIHYVNIRPGDGLFHNRTTKAEHFYAREPEPFVLHHDQTPESHILKGNWCPGPGSLETFMQYFYGQPPPATQPPSRHVPHEKLQSHVILGEPKLLKRFFKTTMGSDYCPSEWRQVQKAPNLHLQQSNLPQGTGEFDFLTMNQKMLKPHGTAPALVTEEMLQRCKYSHMEPPLGGLRFFSTQYKDEFPFKYQGPAALRLKNPQEGFVPLGTPHQHGCREKTDPRAPQPPMYPCPSQ | |||||||||||||||||||
1 | 2pffB | 0.07 | 0.07 | 0.94 | 0.74 | DisCoVER | LFRAVGEGNAQLVAIFGGQGNTDDYFSNTPDKDYLL--SIPISCPLIGVIQLAHYGATGHSQGLVTAVIAEIGVRCYEAYPSPMLSISVEISLVNGAKVVSFHVYDTFDIVDCIIVKWHILDFGPGGAGRVIVAGTLDDYGFGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGG--GG--GGGGGGGGGGGGGGGGGGGG--GGGG-G-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------G---GGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
2 | 5xjcQ | 0.05 | 0.03 | 0.68 | 0.67 | DEthreader | VTIIYKEIVKRFAIRIM-LEFSYL-SSKAYLMSICCMVNE-KF--ENVPAWEHCFNSL------------TMDKVHYCERFIELMIDLEAL----QLLDMIDENIVPTEYYS----EGCLA-----KLNLQFLDYLLRNFNLFLESENNFVLIRLMCHILGYPSTMVVGPPTGKVAVQ--VTHSNTCTHAKRLFKIPLLRLKRWIMIGDHHQLPPV-I-KNMAFQ-YS------LF-RFV-VPTVD------LDAQGR------------------------NWRYKNL-------------E----NPYFY-QNLGEAEY-------------GYPADKISILTT--YNGQKHLIRD------------------------TVDRFQGQQN-Y-ILLSLVRTRVGHLRVAMSARL--ELTPAFSLTRPNG-------- | |||||||||||||
3 | 5oljA | 0.03 | 0.03 | 0.98 | 0.59 | CEthreader | IFIKKFDFDTEVQVTTDGQINSVLNGATDWVYEEEFGV------TNLMSWSADNAF--LAFVRSDESAVPEYRMPMYEDKLYPEDYTYKYPKAGEKNSTVSLHLYNVTKSVSLPIDADGYIPRIAFTDDFKMYYVHPKSLVPKLILQDMNKRYVDSDWIQALKFTAGFAHIYLYDNKGVMHRRITSGNWDVTKLYGVDASGTVFYQSAEESPIRRAVYAIDAKGRKTKLSLNVGTNDALFSGNYAYYINTYSSAATPTVVSVFRSKGAKELRTLEDNVALRERLKAYRYNPKEFTIIKTQSALELNAWIVKPIDFDPSRQQVLDRYSFDWEHYLASKGYVVACVDGRGTGARGEEWRKCTYMQLGVFESDDQIAAATAIGQLPYVDAARIGIWGWSYGGYTTLMCRGNGTFKAGIAVAPVADWRFYDSVYTERFMRTPK | |||||||||||||
4 | 5hb1A | 0.06 | 0.06 | 0.98 | 0.65 | EigenThreader | NRNIASGANVETVADALRRRCGSFCSPDDVVTFKAQEQLQRASEQAHN--SPVLRALLAESLRLFEQVAGSLTPANLTTAVEQYISLKYYAGAIQLCLTVAQQKDRGNFDERKICYNLIHQVLDKLESDFLVVNDSSDEVFHFDLYEWYIEKGWTDRILSIDSPHVITYLQRLAETDFRHAELLCRFYTTRSRFFEAAQVQTNLAKSDLNISLKDRIILLSRAKGNA----SVNTIGISRQQQQQLNHEASELLEIAHIQ--DDLLERLVADPRIPEERKAEIEEFLDGPIRTLTDLFNDYADQANYYDLCLLIFHAADFHNPRTILDTWNNLINQSHFEAEQRREYWEIAEPPLPYVYVSQQIQLIAHRTIFPVNSLLPVVCAYAINNGQDADPCWPIQLFLNLGVPHALVVQVLENVLDTQEAPFTGRRRKLVVQWI | |||||||||||||
5 | 2pffB | 0.18 | 0.09 | 0.49 | 0.37 | HHpred | IAETDSWKAITVLFFIGYEAYPNTSLPPSILE--DSLENNEGVPSPMLSISN------LTQEQVQDYVNKTNSHLP---AGKQ----VEISLVNGAKNLVGPPQSLYGLN-------LTLRKAKAPSGLDRKLKFSNR--FLPVAS-PFHSHLLVPASINKLVKNNVSFNA--------KDIQIPVYDTFDGSDLRSISERI----VDCIIR---LPVKWETTT--QFKATHIGPGGTHRKDTGVRVIVAGTLDINPD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.07 | 0.00 | 0.07 | 0.53 | MRFsearch | ---PDDDYG-----------------GMDLYKTSKAAQDVWNRADNHFK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 3cnfB | 0.08 | 0.08 | 0.93 | 0.55 | FFAS-3D | LF-SDVPLAGANTIIAIMRLFTPRNPQTYIPYTNQRGTVTNEFASRFRTI--VATLANVVNERAVQ------DDMQKATRSCTKQWLRHTQFDNIAVAHTDHTMSNFMLNFTNNFATHVAVVLYQSGVINGPASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNDAVRQLRALMPTLSTSQAQITDVDSTDYGKLTLRFLGTLTRSLKMQNAQIRRIRPDGTVLRYDD-QIDIEAFRWSRYFLDELQLRRLSVGLRLITNPMYLTDDDPDPDFVPDVPEGYVAVQYAHRLFNKRNRVTYTHPPTGMAYPSPTGRPHVERAGMSKLVADNIIASVIKSNWVVDIDIEY-------------TAEVMTPSEGYTQHVDAESIMTAPKGKFMDGLLRPE--ASGEDMRLIYPLQPIS----VARSMRAIVNHNEVDRPRE | |||||||||||||
8 | 5jcss | 0.08 | 0.08 | 0.99 | 1.79 | SPARKS-K | VIELEEP-SEEDLTHILAQKFPILTNLIPKLIDSYKNVKSIMNTKFISLNKGAHTRVVFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLSVCIQMTEPVLLVGEKMLAKKLTVSQQTETYKPKTVAVPIQEFSLKKNEKFHKMLHRCFNKNQWKNYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVESDLLTEPDSEKGDAEPIKAHPDFRCMNPATDVGKRDLPMRFTEIYVHSPERDIIDKYIGKYSVSDEWVGAKKLSDNNTIVDGSNQKPHFS--IRTLTRTLLYVTDIIHIYGLRRSLYDGFCMSFLTLDQKSEAIRLKNVKSIMSYIITPFV | |||||||||||||
9 | 2pffB | 0.05 | 0.02 | 0.49 | 0.50 | DEthreader | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTASFFIASAELVGKFKELIKITAGTLDDYFKGGGGGGGGG--G------G----------G--GGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQMGMLYAVWRADNHFKDGFSLDIVILALME-AFTFAGHSLGEY-------------VMSISLVVVRGMQSYGMIAINTGLIVNYNVENQQYVAAGLRDGGGGGGG--- | |||||||||||||
10 | 1zvoC | 0.06 | 0.06 | 0.96 | 0.94 | MUSTER | RQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVV-TGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPAT-TRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASW--EVSGFSPPNILLM------LEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPAT--DSRTLLNASRSLEYVTDHGPM------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |