Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RAKRRRKGGTPKGWRCHQTEIEEKTKLISILKSLLGQHDDNTRIRRLLCPDPFCEACNNATAEINRLLLPGALEDSASSVSPLASTAP |
1 | 2atyA | 0.01 | 0.01 | 0.84 | 0.71 | DisCoVER | | -------FPPKPKDVLTITLT----PKVTCVVVDISPEVQFSWFVDTQPREEQFNSTFRSV-SEL-PIMHQDWLNGKEFKCRVKTIS- |
2 | 1n63B3 | 0.05 | 0.05 | 0.89 | 0.83 | DEthreader | | LAAHNHIFRWVLADGVCRVTEAVYAIERAIETLA-RLEMD---SADLRIK------NFIQYPLAMKKAMDTVGYGISFFYAVGLTWET |
3 | 1vt4I3 | 0.06 | 0.06 | 1.00 | 0.56 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6y5rA1 | 0.06 | 0.06 | 1.00 | 0.53 | EigenThreader | | TWVVGTAGVLQAFAIVLICCCCTMLTAISMSAIATNGVVPAGGSYFMISRALGPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIV |
5 | 6h82b | 0.19 | 0.11 | 0.59 | 0.24 | HHpred | | ------------------------SKTVGRTNSPLGVLNTPFSFVEKLGGAIPCET--AATYWAHYSSDATGTVELAG---------- |
6 | 5frfA | 0.08 | 0.06 | 0.70 | 0.63 | MRFsearch | | --------------SPCLEKYGLEQAVKKLVKRAAG------------QDDVPGDLRAKVMGRLDLIRSGQSVPEHDVAAAPSSSAPQ |
7 | 3pmiA2 | 0.10 | 0.07 | 0.68 | 0.33 | FFAS-3D | | ---KEKQTLLNQAREDFNQDIGWCVSLITDYRVRLGCGSFAGSFLEYYAADISYPVRKSIQQD------------------------- |
8 | 5jcss | 0.12 | 0.11 | 0.93 | 0.88 | SPARKS-K | | VDLTRQISYITEELTNIVREIISMNMIMEGLNLLKYLLNNIVT------PEKFQDFRNRFNRFFSHLEGHPLLKTMSMNIEKMTEIIT |
9 | 5yewA | 0.09 | 0.05 | 0.52 | 0.45 | CNFpred | | -----------------HARLQEFQNFEQIFEECISQ----SAVKTKFEQH--TIRAKQILATVKNIMD------------------- |
10 | 6ux2A | 0.08 | 0.07 | 0.84 | 1.00 | DEthreader | | QKIL------ELRRKEVLDASKALLGRLTTLIELLLPKLEKQQKCIQPPLILLSIAWAFT-LPFWL--I-----FVSQERRLLKKTMH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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