Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VLSKKEKMKLRRARWLQKIDAIKAAEETRKAEARRKATAVVGDLHPLMEALPELSELVTAGQSRRKVKRCVHGAPRQKAEPTDFSRMTPAQKRKLLDDEMVRFQEVVASPSYQADPLRAIGEHLSK |
1 | 3k5bA | 0.08 | 0.08 | 0.96 | 1.17 | DEthreader | | LAILSQEVEAEIQALLQEAEAKAEAVKREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGEVLERRVEALEALPKP-EWPEVVRKALEAARERGVE-VGAEGKTQ--VE-NSR |
2 | 1xouB | 0.21 | 0.03 | 0.15 | 0.64 | DisCoVER | | --------------------------------------------------------------------------------------------------------VNELSEKAKTDPQAAEKLN--- |
3 | 6p4xA | 0.09 | 0.08 | 0.90 | 0.83 | DEthreader | | --MSFDDLHKATERAVIQAVDQICDDFEVTPEKLDE-LTAYFI-EQMEKGLAMIPADQTSLNSGVQ-YQEQLMMIKV-S-YTSDNSMTS-EI-SEP--VI-CYMEINVEWGFFEVSSALAAVALAS |
4 | 3vrcA | 0.06 | 0.06 | 0.89 | 0.54 | CEthreader | | ---------DLSPEEQIETRQAGYAFMAWNMGKIKANLEGEYNADQVRAAANVVAAIANSGMGALGTDKNVGAVKTRAKPELFQNLEDVGKLARDLGTAANALAAAAAT-----GEANAVKSAFAD |
5 | 5mqfK | 0.05 | 0.05 | 0.98 | 0.70 | EigenThreader | | GVREAAAALVEEETRRYKNYLSYLTAECVNNSMAQLEHQAVRIENLELMSQHGHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWRTIVQLENEIYQI--KQQH-GEANKENIRQD |
6 | 4ehjA1 | 0.17 | 0.09 | 0.52 | 0.29 | HHpred | | -----------------------------------------KSTDDLSKKIASLGDVFV-DA------------FATAHRAQA-STYGVACAGILLTNEIQALEKALKSP---KLPAIEILKE--- |
7 | 3dtpB2 | 0.13 | 0.10 | 0.82 | 0.52 | MRFsearch | | --AEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEER---------------------CDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLED |
8 | 6ignA | 0.16 | 0.13 | 0.83 | 0.71 | FFAS-3D | | LVEKLKTQMLDQEELLASTRRDQDNMQAELNRLQAENDASKEEVKEVLQALEELAVNYDQKSQEVED---------------------KTKEYELLSDELNQKSATLASIDAELQKLKEMTNHQKK |
9 | 5tgwA | 0.19 | 0.14 | 0.76 | 0.91 | SPARKS-K | | --SEFEKLRQTGDELVQAFQRLREIFDKG-------------DDDSLEQVLEEIEELIQKHRQLFDNRQ-------------EAADTEAAKQGDQWVQLFQRFREAIDKGD--KDSLEQLLEELEQ |
10 | 5j1iA | 0.18 | 0.13 | 0.72 | 0.49 | CNFpred | | TLPELEATKASLKKLRAQAEAQQ-----------PTFDALRDELRGAQEVGERLQQRHGERDVEVER------------------------WRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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