Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LCTACHRPDETLAPRKRVQRQRARPQGGVMPAEASLLRRHHFCTLSKSDTRLHELHRGPAGCRAPRPASMDILRPQWLEVPRGTSRPMAAFSHRELPQAMPAATSPSICPEATYSNVGLAAIPRASLAASPVVAEYACIQKLKETDQGPQSLGQGKAKLTPAVQVDILYSRVRKPKKRDPGPATDQLDPKGRGVILPLGSDQSYETLPLRGLGKDDGLLENVYESIQE |
1 | 5yfpE5 | 0.06 | 0.03 | 0.53 | 0.74 | DisCoVER | | --------------------------------------KKKDFVPKSQE--L--L-----------DQDTLPAIVLNFELTLIGEELYLLHYSHFQVNS-------------IGGVVVT-------------KDIIGYQTAIE------------DWGVASLIDKFATLRELANLFT----VQPELLESLTKEHLADIGRD-IIQSYISNRE---------DF--NH- |
2 | 5lqwO | 0.04 | 0.03 | 0.74 | 0.67 | DEthreader | | TQPRRAATYKYMIDEASSATNTNIASLT-----K-ENSYVPSTGMT---LSNTVLLLLLGVTLILENL----------------------------YILGLITRKMMCEFP--C--EPEFAKVLYTAALCLTIVSMLHETPLFFKTMLRVRNIRNQLF-N-ITRCFISGFPMNIVQL------GPTGY--NVSVHTLMLTSKEFI-----KEEWLIDM-VP-QIF-K- |
3 | 1vt4I3 | 0.07 | 0.07 | 0.99 | 0.87 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 2wl2B | 0.05 | 0.05 | 0.96 | 0.57 | EigenThreader | | GDVIGKYHPHGDSAVYDTIVRMAQPYMLVDGQGNLLVNGNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAA------IINGRIEEAYRTGKTGRPYQVNKRVEGISALRDESDKDG--MRIVIEVKVLNNLYSQTQLAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANPWQLGNVAAMLEDAARPEWLEPEFGVRDGLYYLTEYKELLDQIAE |
5 | 4yuuo2 | 0.38 | 0.06 | 0.16 | 0.25 | HHpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGMFLDPKGRGMA--NGYDMA-VALPALEADGGQEVLEND------ |
6 | 6hwhi | 0.16 | 0.07 | 0.44 | 0.48 | MRFsearch | | -CVSCHGAN-------------------------------------------------LQGVPDRGPSLIGT----------------------------------------------------------GEAAVYFQVSTGRMPAMRGEAQAPSKPPHFDESQIDDLFRLNCASC----------HNFTGKGGALS---------SGKYAPDLGDANPAQIYTAMLT |
7 | 2ftcA | 0.08 | 0.05 | 0.66 | 0.42 | FFAS-3D | | -----------------------------------------------------TLDMALGKKKNVEPFTSVLSLPY--PFASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKI-----WDDEIVADFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELF-----------------KNGHEIKVDEERENFLQTKIATLDMSSDQIANLQAVIN- |
8 | 5a9qA | 0.12 | 0.11 | 0.90 | 0.94 | SPARKS-K | | LGQDGQGMSASVSQNAIVSAAGNIARTQIAVIENSESLDCQLLAVTHAGVR---LYFSTCPFRA-RPNTLTLVHVRLPP---GFSASSTVEKPSKVHRALYSKGILLMAASENDNDILWCVNHDTFPFQKPMM-ETQMTAGVDGHSWALSAIDTPLNKDHIPITD---------------SPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVEIERFFKL |
9 | 7jh6A | 0.27 | 0.06 | 0.21 | 0.45 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------KLELQAIKQYEKLRQTGDELVQA------FQRLREIFDKG------------------------------------------DDDSLEQVLEEIEE |
10 | 4av3A | 0.04 | 0.03 | 0.85 | 0.83 | DEthreader | | -AAANFAAVVRK--------------------------A-TKIFAIVIAILLMIFTTW-----QTGVAFGASAAGGMMAAALKYQGSVLSVGFLLGLLVFGQVDNLYVPAMTVGYAGCIADRGGVYKGGLADLLESVGVISYMFPIYVQVHQVPKETIQALISYPIFFALVGLGSMLILVIVKKISLWTS-ALLTVVLTATSPWSAGIMLSFVTSVSVDFASAFAALF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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