>PF15322 (309 residues) AQGLTSTGMQRVSFRFGGPMTRSYRTTARTGAPRKMRVTVEDEDDLVAEADHLAGPAAAE LLASTVYTGISQSRLSQEEDGSLEEGVVIDAGKSNTRSGIPSMDSTTRGSSSRFTANSQE PEIRLTSSPPPSTWRSSMDLPPSGSTLNQWSTAGATPNAWPPPSATAMPPPEDLRVVLMP WGPWHCHCKSGTMSRTRAGKLHGLSGRLRVGALSQLRTEHRPCTYQQCPCNRHREECPLD SGLCPDTSCTTQTTTTTTASMPPLSARLRPTPFPMSSPSPALDFWKRVRMGLEDIWNSLS SVFTEMQPI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AQGLTSTGMQRVSFRFGGPMTRSYRTTARTGAPRKMRVTVEDEDDLVAEADHLAGPAAAELLASTVYTGISQSRLSQEEDGSLEEGVVIDAGKSNTRSGIPSMDSTTRGSSSRFTANSQEPEIRLTSSPPPSTWRSSMDLPPSGSTLNQWSTAGATPNAWPPPSATAMPPPEDLRVVLMPWGPWHCHCKSGTMSRTRAGKLHGLSGRLRVGALSQLRTEHRPCTYQQCPCNRHREECPLDSGLCPDTSCTTQTTTTTTASMPPLSARLRPTPFPMSSPSPALDFWKRVRMGLEDIWNSLSSVFTEMQPI | |||||||||||||||||||
1 | 3e9uA | 0.07 | 0.03 | 0.47 | 0.64 | DisCoVER | -----------MGGSEFGIFAF-----------TDSVFEIT----E------S---V--GRFELKVMRYARGTVIVPYWTENATESKDYEGARGEL--VFENNESEKFI-DLFILESSYEKDVSFKVHIGEPRLAPDDGLAAKIKEVEKKPVQDLTDLLLS---KPRNGELTTAYVRIRESQ--------------------------------------------------------------------------------EFKAV------------------------------------------ | |||||||||||||
2 | 6s8bK | 0.06 | 0.04 | 0.65 | 0.67 | DEthreader | FLDYKLA-------------------LILKYQLF------LGIDTIGVADFIDLWISSYLVSALLW------I-E--GP-VISLRFNQFYFYLERKGVEIIKELITKYIFNLFPPYPIIPGRIKYNEGKEGRCSLVCRVLTEDLLQTTPLNIKVTPELWCLRALAEPRLMRILLLG----ADSDALNRGLLVELELVNKHK---G---FVIYADLLAISRRFAGFGLENGF---------------YYPSLPIVG------------------EEGKE------------------------------- | |||||||||||||
3 | 4a7kA | 0.08 | 0.08 | 1.00 | 0.61 | CEthreader | KNGFNDVIITDQYGSSMDDIWAYGGRVSWLENPGELRDNWTMRTIGHSPGMHRLKAGHFTRTDRVQVVAVPIVVASSDLTTPADVIIFTAPDDPRSEQLWQRDVVGTRHLVAIVPAAETDGEMRFDQIILAGRDGVDCLWYDGARWQRHLVGTGLPEERGDPYWGAGSAAVGRVGDDYAGYICSAEAFHGNTVSVYTKPAGSPTGIVRAEWTRHVLDVFGPLGSIHQVVCADIEFLVAMMGADPPDFQRTGVWCYKLVDRTNMKFSKTKVSSVSAGRIATANFHSQGSEVDIATISYSVPGYFESPNPS | |||||||||||||
4 | 5i9dA | 0.06 | 0.06 | 0.97 | 0.62 | EigenThreader | APTVVTYNTLIDGLCKAGKLDEALKLFKGIKPDVVTYNTLIDGLCKAEALKLFEEMVEKGVTYNTLIDGLCKAGKLDEALKLFEEMIKPDTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEK--GIKPNVVTYSTLIDGLCKAGKNVVTYNTLIDGLCKAGKLDEALKLFEEMKGIKPDVVTYNTLIDGLCKAGKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGLDEALKLFEEMVEKGLTYRRVVEY------- | |||||||||||||
5 | 5ij7A | 0.17 | 0.12 | 0.72 | 0.43 | HHpred | -------MTRECSVTSDFPKQVIVPMYSWSPLQQN--FMVEDDEIFVELVNALGQPKIFEAISSMFPDKGTAEEL----KEKYKE-----CTPNIDGPNAKSVQREQLHSHTLFCRRCFKYDCFLHPHATPN-----------------------TYKRWSGAEATYYDNFCAIARLIYPCDN-SCPCIAQNFSSECQNRFPGCRCK---A----------QCNTKQCPCYLAVREC--DPDLCLTCGAADHWDSNVSKNC-SIQRG----------------SKKHLLLAPSDVA------------- | |||||||||||||
6 | 2pffB | 0.17 | 0.01 | 0.07 | 0.43 | MRFsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMDLYKTSKAAQDVWNRADNHFK----- | |||||||||||||
7 | 5x4zC | 0.10 | 0.08 | 0.82 | 0.39 | FFAS-3D | --------------------SKEPKVNIINAQDDEVELMLSDVNLSLANSLR------RTMLAEVPTLAIDLVEIKMNTSVLADEFIS--HRLGLIPLVSEDVEEMKYSRDCTCEDYCDECSVVLELSA-----RHEGETTDVYSSSLIKVSGPGNLNVGEPVRRDDYDQ--GILLCKL-----------------RNHQELNIRCIAKKG-IAKEHAKWSPCSFEYDPHNKLKHTDVDAKKEWPDSKYATWEEPPKPGEVFDYKAKPNRETTGSLKANQVFSRGIKT---LQEKLANVLFELENSRPA | |||||||||||||
8 | 4btgA | 0.14 | 0.13 | 0.95 | 0.79 | SPARKS-K | LRTLAPSEHELFHHHVLSPLGFILPDAAYVYRVGRT-ATYPNFYDCVRASDLLSAPAISQHLANAATTAFERSRGNFDANAVVSSGRLWSPSTPKELDP-SARLRNTNGQRGRAEVIFSDEEL--SSTIIPWFIEAMSEVSPKLRPINETTSYIGQTSAIDH-----MGQPSHVVV----YEDWQ-FAKEITAFTPVKLANNSNQRFLEPGISDRMSATLAPIG-NTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTSNDLKRSMFNYYAAVMHYAVAHNPE | |||||||||||||
9 | 3n6rA | 0.15 | 0.04 | 0.24 | 0.18 | CNFpred | ------------------------------------------------DLRRVAAAAAAMHRVAEIRRTRVSGRMDNHERR--GTEWVVTLQ-----GADFPVTIAADHDGSTVSFDD-GSSMRVTSDW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 3jbhA1 | 0.04 | 0.02 | 0.63 | 0.67 | DEthreader | ----------GLFC--------IYTNRTV-QIYKRVPPAI------S-LITGES-AK--SSRFLLEKARV--ISQQTLE-R---------SYHIFYQACMLGLAKAFDTFK-DIAGFE---N-LQ-----------------------------------------------------MGIILEEESM--FPKATDFQLKPKFSIAHYAGTVPYNITGWLENKD-GLGAEEKG-------------RKKGASFQALENRLMASLHSTQPNMLGEERDRLGKIVTWLQAWIRWYLSKKEFKKLQEQRVAL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |