Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | WWKLTFLRRKKSQPKVLYEIPAEFVSNSSSSGQHGSSSASGAPEDAMLDPQLDARLERIVDKTTASKGRHVKVSHSGRFKEKKKVRATLAE |
1 | 1wj4A | 0.08 | 0.05 | 0.69 | 0.51 | DisCoVER | | KAQLMLRYPDGKREQITLPEQ-AKLLLVNEFELLTNFPRRKLS---HLDYDI--TL--Q---------------EAGLCP----QETVFV- |
2 | 3c9vN4 | 0.12 | 0.12 | 1.00 | 0.52 | CEthreader | | VEELKALSVPCVEEGVVAGGGASKLADLRGQNEDQNVGIKVALEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILD |
3 | 3sy3A | 0.14 | 0.13 | 0.97 | 0.62 | EigenThreader | | ATKNTEEEFHALCKSFSIEVNHYFETPNSSLKEAGSVNQLCKLQIPALTYGSLTTERAETLFE---GGTLVFDHYNHDYEIEFEVQDEETG |
4 | 2afjA | 0.17 | 0.09 | 0.53 | 0.23 | HHpred | | ---------------------------------------TPTSQALYSDFSPPEGLEELWNP--KDCSENIDVKEGGLCFERDGVRGKR-- |
5 | 2pffB | 0.07 | 0.03 | 0.45 | 1.43 | MRFsearch | | ---------------------DDYGFKQGGGGGGGGGGGGGGGGGGGDLYKTSKAAQDVWNR----------------------------- |
6 | 1vp0P | 0.18 | 0.18 | 0.96 | 0.27 | FFAS-3D | | --RKLRTRRKVRTTTAASGRLRLYAQIIDDSRGQTLAAASSAALKSGNKTDTAAAVGKALAAAAAEKGIKQVVFDRGSYKYHGRVKALA-- |
7 | 5jcss | 0.08 | 0.08 | 0.93 | 0.99 | SPARKS-K | | ADCFAGAIGEFKALEPIIQAIGESLDASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSM------NSTLFAFTNHSLRLMEQ |
8 | 4ky3A | 0.27 | 0.12 | 0.45 | 0.62 | CNFpred | | --------------------------------------------------ELQKVLNELMDYIKKQGAKRVRISITASSKEAYKFLAILAK |
9 | 3odnA2 | 0.07 | 0.07 | 0.88 | 0.83 | DEthreader | | --------RMSGILKAKFIFLLKESRTNMFIRTYGVYERNSYVDLFKELEYFFRTYGQALTTASEVAK--A-MDKVERLGSFNDVRRQRVD |
10 | 4yddA | 0.13 | 0.13 | 1.00 | 0.62 | MUSTER | | KDKFYFWNAKTGKPVIPKGSWGDQPEKKGSPVGFLGRNTFAFPKGYIDLGDLDPALEGKFNMQLLDGKTVEVRPVFEILKSRLMADNTPEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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