>PF15318 (202 residues) MGNNSSHKRTKVPKQARKERPPDMDKAGRKQQLFSHLKQKKPSRWVRVNVDDARSREVTL GWAKIVLLFPLDKRQQLAEVAAGPGARPRRPGEDATGAPEGSPAAAAAPMLRGAGDGVDR REGARGREMKKILVLLLLLDARLQEEGRCAAGAPGGGAGAGGGANAEQGWQRLYARLLTE SEVDREAKPAEEQPRKRHRCPR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MGNNSSHKRTKVPKQARKERPPDMDKAGRKQQLFSHLKQKKPSRWVRVNVDDARSREVTLGWAKIVLLFPLDKRQQLAEVAAGPGARPRRPGEDATGAPEGSPAAAAAPMLRGAGDGVDRREGARGREMKKILVLLLLLDARLQEEGRCAAGAPGGGAGAGGGANAEQGWQRLYARLLTESEVDREAKPAEEQPRKRHRCPR | |||||||||||||||||||
1 | 3gh8A | 0.06 | 0.04 | 0.71 | 0.77 | DisCoVER | RSVR----FISSE-------HV------------------MEVIENVIAAGTAPS--G----AHTEPWTFVVVKKHIREIIEEEEEINYMKRMGKRWVRTNWI------K-EYLDTAPVLILIFK-QV--HGFKVHY-YNEISVSIACGLLLAALQNAGLVTVTTT-----------PLNCLRGRPSHEKLLVLLPVGYPS- | |||||||||||||
2 | 5twvB | 0.04 | 0.03 | 0.75 | 0.83 | DEthreader | WILF----NLLSKGY---------FRILADLLGFAGP-LCI-FG-IVDHLGFFLGNAYVLALLFLLRTQAYYAFLCPNLWTM----PVQIIVGV----AAIFHILVTPL---------FLTAANRWLEVCMEYIGACVVLIAAATSISNSLRELSAG---LVGLGLTYALMVSNYLNWMVRNLADMEI-------------- | |||||||||||||
3 | 6wilA2 | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | QLPVGYYDLGFSYNDYQYRQGTVAPESGYPVIYHGNSQQANLNLSRVISRSGQHKTSVYGKLYHKESQSFLNDIEINVLHRKTSGWNLGVQHRQDGSIDYRRGGVSRAPLWSADLRYTTPFLLLDKPAQYRLNWRGQYAPKILVPNDRFYIGGRYSVRGFDGELLSGDNGQYVQQEISLNAPIPNTQFYAVDQGWVNGRNSI | |||||||||||||
4 | 5mkkB1 | 0.07 | 0.07 | 1.00 | 0.57 | EigenThreader | -TGRSAAPLLRRLWPYVGRYRWRYLWAVLAGLVSIFFFVLTPYFLRLAVDAVQAYALAIVASAALSGLLSYAMRRLAVVASRQVEYDLRRDLLHHLLTLSAVREMVGPGILMGSRLSFLVLLAFLSMYAVNARLAFYLTLWFQDLNRLYVEKSLALARVEGPMGFAFLTVLWAGGAMVVRGELVQFNAYLAQLTWPILGLGW | |||||||||||||
5 | 6b40A | 0.21 | 0.15 | 0.73 | 0.43 | HHpred | -------------WAKT--ANVKKQIVDAESKLDKHLKESNPTLMM--AGNYARELFKAEHADKLVALVDKPDRKSLVEVQLRKVYRANWPLNDMSDEVRQYTNEHVQELIELSSEGNEAGKGNTYNGLRDVLCTHWLYSKTLRDGGG-GGGGGGGGGGGGGGGG------------------------------------- | |||||||||||||
6 | 2pffB | 0.24 | 0.09 | 0.39 | 0.72 | MRFsearch | ------------------------------------------------------------TGVRVIVAGTLD-----------YGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------GGGGGGGGGGGGGGGGGGSKAAQDVWNRAD------------------------ | |||||||||||||
7 | 2o1uA4 | 0.13 | 0.09 | 0.70 | 0.41 | FFAS-3D | -------------DESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESP-----CALVASQYNMERIMKAQAYQTGKDISTNYYASQKKTFNPRHPLIKDML-----RRVKEDEDDKTVSDLAVVLF--ETATLRSG--------------YLLPDTKAYGDRIERMLRLS--------------------- | |||||||||||||
8 | 3rylA | 0.10 | 0.09 | 0.94 | 0.67 | SPARKS-K | LSEDLFKQSPKLSEQELDEQAADID---WHQVISEKTRGLTTEEAKSEHRYVQAFCREILKY-------PDSVDVALKRLQTGRERLFTTTDEKGNRELKKGDAILESAINAARAISTEEKNTILSNNVKSATFEVFCQNGKTAFYALRAGFYSAFKNTDTAKQDITKFKDNLQAGFYSYQGLTNRVAQLEAQLAALSA--- | |||||||||||||
9 | 1uaaA | 0.09 | 0.04 | 0.43 | 0.46 | CNFpred | ---------------------------HEAERVTGELIAHHFVNKTQ--------------YKDYAILYRGNHSRVFEKFLMQNRIPYKIS--------------GGTSFFS-------------RPEIKDLLAYLRVLTNPD----------------------DDSAFLRIVNTP------------------------- | |||||||||||||
10 | 3k07A | 0.11 | 0.08 | 0.75 | 0.83 | DEthreader | LGGAGVTTYDRSQDRAIDNLGAIAVGAMVDAAIVMIENAHKREW--Q--------------VDAEVPAISLIITLSFI----------PAFTKTYAMAGA-L----------KLKLMVTFIALAGVAAEFGVVMLMYLRHAIEAVP--SL-NNPQTFS-E-QKLDELYHGAVLRVRPK-AMTVAVIIAMIGGMT-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |