Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IRPQMNHPHTRNLKKTDPVSKYFQYKQDWDTFRAPGEKDRKGLRWGIREQMLYKSQAPPKPQRIYVPNTYVVPTEKKRSALRWEVRHDLA |
1 | 2do5A | 0.19 | 0.07 | 0.36 | 0.72 | DisCoVER | | ---------------------------------GYGAWAAQELQAKLAE-------------IGAPI-----QG------NREELVERL- |
2 | 5iauA | 0.01 | 0.01 | 0.90 | 0.83 | DEthreader | | V--RSSNVDNE---ISVEVK-HILWLFA--NDTPVQNNNYWLSCTTALLGDT-DYDFYVDRNELAMSARKIQTDIQYLENANKKLADVAF |
3 | 1tnzL | 0.07 | 0.07 | 1.00 | 0.49 | CEthreader | | YCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGSHGGSTFCGIASLCLMGKLEEVFIMRQQNGYHGRPNKPVDTCYSFWVGATLK |
4 | 3cazB | 0.03 | 0.03 | 1.00 | 0.57 | EigenThreader | | KEVEKVLDSVEPKLTSSGTKWRVVAQHIKDICSDLNQAGASAAHDFDVRYLDIHKHGRTDKYRERYDHYKVKLRIERNQQKFKDAEAAYS |
5 | 2ygwA | 0.09 | 0.07 | 0.76 | 0.31 | HHpred | | -----YGE-KHRGYALNPVANFHLQNGAVLRINWMADVSLRGITGSC-GLMANYRYFLGPNSTSYLGSKIIKASE--------------- |
6 | 4jx2A | 0.15 | 0.10 | 0.67 | 0.58 | MRFsearch | | ------------------ADYNYYNNTVWGARH---------NRRIIANEVFTNITSIFLPDRPAIPGDYTY---SKPPKIEDFLRLKFS |
7 | 2r1fA1 | 0.06 | 0.06 | 0.93 | 0.43 | FFAS-3D | | FKAGTYRFTPQTVRELKLLESLSDYLKQLREAPYIKHTLSDDKYATVAQAL--ELENPEWIEGWFWPDTWYTANTTDVALLKRAHK---- |
8 | 6s8bK3 | 0.11 | 0.09 | 0.80 | 0.90 | SPARKS-K | | ------------EIPSASIKTFEEMIEDLKEEEVCEKPSESVSMWQWFNKNY-----YNGINLTIDPEEYWF-SEKRRRYYFSVFRRHRI |
9 | 2xrhA | 0.17 | 0.10 | 0.60 | 0.55 | CNFpred | | ------------------VDYTKELKKRMEKMPE---DKRKAFHKQLHEYATKNT---------------DKMTVADFEARQKAVKEALK |
10 | 2onjA | 0.02 | 0.02 | 0.92 | 1.00 | DEthreader | | -KYFATIIVGIIKFG-I-PMLIPLLIKYAIDGNHLTTEKV-HLTIAIGIALFIFIVPIERQAQSITSMVFLDE-D--YDIKNRFLTLRNQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|