>PF15308 (672 residues) KMVISVHQSPQDQESMAGKEISFVRQESFTKDKSSSAVPQNKLPHISSHPLLKDLEAVRS TRMDFGQDTHLLLKDTETALAVLEAKLLGQSQKLEPSEAAGQLEDSLSGDSDVDTASTVS LVSGKNVPASAPKRKAVASLQKEKSSSSPSIQDQCGQPSARDRLTEKRKANVPEAPRCVE ATKRFQMKRSAGTRGSLDFTDDERSSSLPYLPVPDAVVSDHEHSVPRPAPRRKPFTQAAK EDHSKTTANVQKIQQVLTRSNSLSTPRPTRASKLRRARLGDASDNECVDTEKTASNPEAA APGSKQSTETKKLSRLDILAMPRKRAGSFTVPSDSETAQSRTGFSGRSVESYRKATVSEI RAAARKTAAAASAKQPFSRTRSSSVKYSPSSTSRRRPQGSDYTSTSEEEYGSNHSSPKHK RSHTSTATQTPRIRGSGLGKQKHNGRETDDDEDFDDHPDPYNFMAQTAEIAEIARLSQTL VKDVAILAREIHDVAGDGDSQSSSGTGPSTSLSSVPNTPASTISAREELVQHIPEASLNY QKVPPGSVELKSFDQNMNDNREDDLSKKTRTRNREEVIFDNLMLNPVSQLSHTIRENTEN LAEKMKILFQNSERTWEEMEAKINSENEVPILKTSNKEISSILKELRRVQKQLEVINAII DPTGNLDVVASN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KMVISVHQSPQDQESMAGKEISFVRQESFTKDKSSSAVPQNKLPHISSHPLLKDLEAVRSTRMDFGQDTHLLLKDTETALAVLEAKLLGQSQKLEPSEAAGQLEDSLSGDSDVDTASTVSLVSGKNVPASAPKRKAVASLQKEKSSSSPSIQDQCGQPSARDRLTEKRKANVPEAPRCVEATKRFQMKRSAGTRGSLDFTDDERSSSLPYLPVPDAVVSDHEHSVPRPAPRRKPFTQAAKEDHSKTTANVQKIQQVLTRSNSLSTPRPTRASKLRRARLGDASDNECVDTEKTASNPEAAAPGSKQSTETKKLSRLDILAMPRKRAGSFTVPSDSETAQSRTGFSGRSVESYRKATVSEIRAAARKTAAAASAKQPFSRTRSSSVKYSPSSTSRRRPQGSDYTSTSEEEYGSNHSSPKHKRSHTSTATQTPRIRGSGLGKQKHNGRETDDDEDFDDHPDPYNFMAQTAEIAEIARLSQTLVKDVAILAREIHDVAGDGDSQSSSGTGPSTSLSSVPNTPASTISAREELVQHIPEASLNYQKVPPGSVELKSFDQNMNDNREDDLSKKTRTRNREEVIFDNLMLNPVSQLSHTIRENTENLAEKMKILFQNSERTWEEMEAKINSENEVPILKTSNKEISSILKELRRVQKQLEVINAIIDPTGNLDVVASN | |||||||||||||||||||
1 | 4btgA | 0.10 | 0.09 | 0.86 | 1.45 | SPARKS-K | FAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWENIDPVMYARLGGALSVDETEYHQSTACNPEVPPTAILEQLRHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNVDCVRASDLLSSVDSKMLQATFKAKGAL----APALISQHLANAATTAFERS---------RGNFDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFRGR-------AEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSY-----IGQTSAID----------------------HMGQPSHVVVYE------DWQFAKEITAFTPVKL---ANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSKNRTAVYEAVSQRGT------------------VNSNGAEMTLGFPSVVERDYALDRDVAIAALRTGIVDESLEAR------------------ASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEQGVAAEQNVRTELRIPVGYNAIEGEPLEAIPSEVLQAKVLDHEASTEFAYEDAYSVTIRNKRYTQRRERVR--ILKPTVA-HAIIQMWYSWFVEDDRTLAAARRTSRDDAQNAVTLLRKIEMIGTTGIGASVHLAQSRIVDQMAGRRHRIRIWAGLAQMMGLLEALTKV | |||||||||||||
2 | 1zlgA | 0.09 | 0.08 | 0.89 | 1.08 | MUSTER | AAGPGAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQNNGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKAS---GFAAACVESCEVDNECSGVKKGHTCQVPKTLYKGVPLKPRKELRFTELQSSSKFNISIEPVRRWNYGIHPSEDDATHWQTVAQTTDERVRPSRWRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKL-------QPDCELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKKKTEDPTVNRFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKQPIRPKSHSKAEAVFFTTPPCSALK------------------------------GKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFS--KMAKANLEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLR------------PSTL----RLEVQVLTPGGEGPATIKTFRTPELPPSSAHRSHLKHRH--------------KPSPERYG--KPIPNP | |||||||||||||
3 | 5yfpC | 0.06 | 0.05 | 0.81 | 0.71 | DisCoVER | EIHFLLTSARDFQEQVVV---MAKEA-TLFSRLSGIISKFDKLLLTIVMAAEQIRLFKIYDLEEREDLRIEA-IRNIIKKKEIEIEKSSIKKLPNSKNTDEKV--IEY----PTN-KGLYQEIMISTRTAPR-GYKHFLINGINNSISEMFGEMREKYVGDQK-----FDVLDNMDWIFNELIVKEHIANCCPPHWNIFEVY-------FDQYYKELHSLIDLVESEPETIILILADKTFQDTLKQDKSV--I--GDKEKLLEKAEFFLE-RSTPPHSDSDGLLFLTFTQVVAAGTNQAKILVGVVERFSDLLTKRQKNKIEKKQINYNHDIDCPGGLVEYLIAVSNDQMKAADYAVAISSK-YG-KLVKVYEKQITHLEGTLGFAVASSLGLILMFDDLRKPYQEIFSKTWYMGSQAQQIALDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSFEHSFKIFYQLFVKVLDGNESKDTLITQN-FTVME----FFMDLSC----EPIDSILDIWQKYLEV-------YWD-SRIDLLVGILKC-RKDVSSERKI----------VQQATEMLHEYRRNMEA-D------------------REPT--------------------------------------------LM-RRFVLEFEK------ | |||||||||||||
4 | 5mpbZ | 0.07 | 0.04 | 0.59 | 0.67 | DEthreader | -------------------------------------T------------------------YILAAQKTSFEY--E--V--QD-IGNGKLHFLY-LAKELNL-TGP----------K-VPEDIY-KSHLDNSKSVFLNLGYCNDKLIVDNDNWVYKT---GM-SAVASIGQLKYVEPVKAGALLGIG----------ISASG-----VHD-GE-----------VEPALLLL-Q---DYVTN-PDTKISSAAILGLGIAFAGSK-----------------------NDEVLGLLLPIAASTLIETA-M--LA-LAHVFVGTCNGDITTS-IM-D--NFLERTAIELKTDWVRF------------------LALA------------------LGILYMG-Q-GEQVDDVLET-ISAIEHPMSAIEVLVGS------TGDVLLIQDLLHRLT-KKSSDKDATTDGKNDDEEEKEAGIVDELAYA------------LRHFGHLMPMGIVSVSDPQMKVFDTLTRFSHDA-----LEVSMNS-------IFAMGLCGATNNALAQ--RQLASYYSRE---ITRLAQ-GLL--HL---------G-MTMDVFN---------------LTTAVGLV---------ALNDEGE-------------ETVGQAG | |||||||||||||
5 | 1vt4I | 0.05 | 0.05 | 1.00 | 0.72 | CEthreader | RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
6 | 5o9zG | 0.06 | 0.05 | 0.91 | 0.82 | EigenThreader | LQ----TGENHTSVDPRQTQFGGYLTDLNSMIPTHGGDINSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANG-------------NTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQV-------FPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMKCPHSTPLWLLLSRLEEKI-------GQLTRARAILEKSRLKNPKNPESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRKIFHRTVKIDSDLGDAWAFFYKFELQHQQEEVRKRCESAEP--RHGELWCAVSKDIANWQLRLVAGRIKNTF----------------------------- | |||||||||||||
7 | 1vt4I | 0.16 | 0.04 | 0.28 | 0.51 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQDMPKSIL-SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEQKFVE-----------EVLRINYKFLMSPIKTEQRQPSMMT------RMYIEQRVFAKYNVSRL-QPYLKLRQARPAKNVLIDGVLGSGKTWVALDVCLSYPETVLEMKLLYQID-PNWT-------SRSD--HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLNVNAKAWN-- | |||||||||||||
8 | 6cq0A3 | 0.13 | 0.04 | 0.29 | 0.43 | MRFsearch | --------------------------------------EKISLPKVHPYDLDGDASMAKAITGVLLLYQELMRKGIRWLIELIKDDYNE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVHKKTEVVITLDFCIRNIEKTVE--------------------------------------------------------------------------------------------LGEISDIHTKLLRLSSSQGTIETSLQDIDSR-------------------------------------------------------------GSLADAWAHQERNVEKLQVLLNCMLAYNEEQIHKFDKQKLYYHATKAMTHFTDEIRKMLHLRKQLLS---------LTNQCFDIEEEVSKYQEYTNELQET------------- | |||||||||||||
9 | 3cnfB | 0.06 | 0.06 | 0.92 | 0.79 | FFAS-3D | --------ASEADDRIVGPTVNLFKYGAAVVDTATGIDLTKGIPLVQDLLVPIGVTAGAEQSAEYVSGLLMVLDNRLVIVGETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALLRDFTQVNWLNRDITNMLQQLDYVRLVKTIVGHALNIDHFAASVLNINLRALMEANVTADDRIKALQAHSMISTQ--------FHGPNQGALRPELAFD-HDHIIRCLMLAAANYPRLEGIIVQINTGYVASANVIRPVSEKRYF-PENLEQNQSAARARASEADISSIHLAIAREVSPMFNVHELKKIAESFEDPSSIVVVLEFILFPT--------------------EFNRIKGDIQNVLLLFFSRWYPVEYGIFVQRGATYTINAAGEFEFSGRNEK-----WDQALYLSEHFPALFSDVPLAGANTIIAIMR-LFTPQGFLRTDDLAIAANFPRASRNPQTYIPYTVTNEFASRFRTIVATLVVNERAVQDDMQK------ATRSCTKQWLRHLETQFDNIAVAHTDH---LSVVYATMSNFNNFATHVAVVLYQSGVINGPASTYLRENEVLVVQMNNNRYHESVLEIADIQADFIQTSDAVRERIAQITDVDSTDYGKLTLRFLGTIDIEAFRWSNPRIARRFNGVRIMYLTDDDPDPDDVPEGYVAVQYAH | |||||||||||||
10 | 5yfpE | 0.08 | 0.07 | 0.92 | 1.37 | SPARKS-K | -------------------------------------------SLYELDPKWKKLLKTDNFLGGLTV------NEFVQELS---KDHRNDVLIDANTKNLPTNEKDQDIWKQLDPKPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHTNVTQVVSPLGDKLETAIKKKQNYIQLIRRYNDFYSMGKSDIVEQLRLSKNWKLNL-KSVKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLNAIILNIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETSMQNLINDVETEEKATHVIQLFIQRQKIEPRRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQLLEIDDSNQILSTTLEQCHYLYDRSKY-FGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSL-NDVDSMLKCVVESLYILEILKIMFLGIDSYMEIALEVAYWKICKVDINKTAGVVNLNFLKFMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQKMEILINIILQETI-TVISTKFSAILCKQKLPAIEIVNILNLIFEQKGKNLQTFLTLIGEESHYSHFQVNSIGGVVVTKDIIGYQTAIELANLFTVQPELLESLTKE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |