>PF15304 (350 residues) IPARPLLTKFSLITTPRRERGRPSLYVQRDMVQETQREEDHRREGLQVGRASTPDWVSED PQPGLRRALSSDSILGPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGNPQLEFSAFGAF GKPSSFSTVEAKATASPKATMSPRHLSESSGKPLSTKQEPSKPPRGSLQANRGVVRWEYF RLRPLRFRAPDEPQQAQVPRGWGREVAGAPALRLQKSQSSDLLERERESVLRREREVAEE RRNALFPEVFSPTPDENCDQDSRSSSQASGITGSYSVSESPFFSPIHLHSSLAWTVEDSV DGASPGQRKKEQWYAGIDPSDGINSEVLEAIRVTRHKNAMAERWESRIYA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IPARPLLTKFSLITTPRRERGRPSLYVQRDMVQETQREEDHRREGLQVGRASTPDWVSEDPQPGLRRALSSDSILGPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGNPQLEFSAFGAFGKPSSFSTVEAKATASPKATMSPRHLSESSGKPLSTKQEPSKPPRGSLQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPRGWGREVAGAPALRLQKSQSSDLLERERESVLRREREVAEERRNALFPEVFSPTPDENCDQDSRSSSQASGITGSYSVSESPFFSPIHLHSSLAWTVEDSVDGASPGQRKKEQWYAGIDPSDGINSEVLEAIRVTRHKNAMAERWESRIYA | |||||||||||||||||||
1 | 2cseB | 0.07 | 0.06 | 0.84 | 0.62 | DisCoVER | DGNVFKPSAETSSTQTLLPTNVPIGEVSCPMQSVVKLQWMDVPEIIASLVPVPAPVFAIPPKPADYNVRTLLRMIPKLFQIQNWHFNLRGGTRVVNLDQIAPMRFVLNGKKVGFIVFQSKIPFSQIGQATVVNYAYNYEPNYYLLATFIDS-----------AAIPQPDV-WDALL-TMSPLSAGEVTVKG------------AVVSEVVPAELSLPNDAARC----------------------MIDRASKIA-----EAIKIDDDAPDEYSPNSVPIQQLSKIASRAMQAFIPSTIITQPVLSDKNNWIALAGVKSLVKTAVSKLSEIQTQGFLD-KVSTHFP---A- | |||||||||||||
2 | 5nd1B | 0.06 | 0.04 | 0.63 | 0.67 | DEthreader | ----------------PQMTV--GRF--------------------------------------EPLTI--T--LSGSTSSTDNHAALTTVTTGWHQTDFAVGMLTIAVYSSADRVR-ADYAG--R----V--VHSTLAHALTAVMSGVGYILVLLGFLRAEIRNVLAQVASLFR-P-AACSAHPGLIATATGTG------------STITVEAGVVDEAAAIGVMG-HGFTNLFAYCASTVH-GGREARLEANDLVPPMMKVAQL--S-----TLLAHGGAWGLSITMPLQWVEITYLEEARHGSV--KM-TML----------------------------------- | |||||||||||||
3 | 2mprA | 0.07 | 0.07 | 1.00 | 0.66 | CEthreader | VDFHGYARSGIGWTGSGGEQQCFQATGAQSKAELKLGQEVWKEGDKSFYFDTNVAYSVNQQNDWESTDPAFREANVQGKNLIEWLPGSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGIENIDLGFGKLSLAATRSTEAGGSYTFSSQNIYDEVKDTANDVFDVRLAGLQTNPDGVLELGVDYGRANTTDGYKLADGASKDTQSMLKGYNKFVVQYATDAMTTQGKGQARGSDGSSSFTEKINYANKVINNNGNMWRILDHGAISLGDKWDLMYVGMYQNIDWDNNLGTEWWTVGVRPMYKWTPIMSTLLEVGYDNVKSQQTGDRNNQEKWGYIKDGDNISRYAAATNSG | |||||||||||||
4 | 3j7jE | 0.06 | 0.06 | 0.89 | 0.63 | EigenThreader | DTNMVDFAMDVYKNLYSDDIPHALREKRTTVVAQLKQLQAETEPIVKHGLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNA-------LSSLWGKLASEILMQNWDAAMEDLTRLKETIDNNSVS----SPLQSLQQRTWLIHWSLKGRDNIIDLFLYQPQYLNAIQTM----------CPHILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNGAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIHQ--------------CISINMLADKLNMTPEEAERWIVNLIRNARLDA---KIDSKMGNGGGGGGGGGGGGGG | |||||||||||||
5 | 6jwpC | 0.17 | 0.04 | 0.24 | 0.34 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKEHEHEQKLLAREQELRDIVANTKLIDISMIN-----N---------SGIVIGTDLQKRNTFTLLTS-----------PDSAKISKEQL------KKLHSNILNEIFSQSQVNK--------------- | |||||||||||||
6 | 6zymt | 0.28 | 0.04 | 0.15 | 0.48 | MRFsearch | ----DLNLKKSWH-----------PQTLRNVEKVWKAEQKHEAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKKIEELQRELREERAREEMQRYA---------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6pasB | 0.14 | 0.13 | 0.95 | 0.54 | FFAS-3D | --LYPGMRSPSFRCTERPEDGALVLHYYEHIVIGIVKTVASKLHNTEVKVEILKTKEECDHVQFITETVSPATFCRVFPFHLMFDRDLNIVQAGRTVSRLLPRVTRPGCK---ITDVLDTVRPHEMTFANVLAHINTVYVLKTKPEEMSVTDPHEEIASLRLKGQMLYIPETDVVV---FQCYPSVTNLDDLTRRGLCIADIPLHDATRDLVLMSEQFEADYLEVLTDKLQQTFRELELEKQDRLLYSVL---PISVATELRHRRPVPARRYDTVTL----LFSGIVGFANYCARNSDHKGKRNPNVYKVETKYSGLPEYEVAHAKMMDLSTIGIHSGNLTSRCET---- | |||||||||||||
8 | 5kcs1w | 0.08 | 0.08 | 0.96 | 1.21 | SPARKS-K | IPTIFFINKIDQNGIDLST-------VYQDIKEKLSAEIVIKQKVELYPNVCVTNFTESEQWDTVIEGNDDEKYMSGKSLEALELEQEESIRFQNCSLFPLYHGSAKSNIGIDFYSSTHRGPSELCYTKKRQRVLHLRDSVRVSEKEKIKVTEMYTSINGELCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIEN----PHPLLQTTVEPSKPEQ--REMLLDALLEISDISALLQEKYHVEIEITEPTVPLKNAEYTIHIEVPPNPFWASIGLSV-SPLPLGSGMQYESSVSLGYLNQSFQNRYGCEQGLYGWNVTDCK-ICFKYGLYYSTPADFRMLAPIVL | |||||||||||||
9 | 1n4mA | 0.15 | 0.04 | 0.25 | 0.22 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKESILKRVKDIGYIFKEKFAKAVGAGCVAIGSQR--------------------------------YKLGVRLYYRVMESMLKSEEERL-----------SIQNFSKLLND--NIFHMSLLACALEVVMAT | |||||||||||||
10 | 5y81A | 0.08 | 0.05 | 0.64 | 0.67 | DEthreader | -----------------------------------------------------PEQKLRNSVLFLLSNENGCQKNTSSFSFILSEVRARELETLRYLLDES--LNLLNIAQYLLLL-FID-------DATL--ARIFVLKNLFRLLFCSLVTSYFDVLTP-L-S-DYWNKLIELSVLVFFKTKEWIEN-----------------------IEESPGKTFIQMLTSGVPKTFSKLCKDH-EA--------DHSMDQNFLRKIVNMSRS--PTVKEKATEITVMPILDSVLLGSFNR-------MQGLSSDFIDLRAWLFILLINMLLDSISKI-S--------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |