>PF15297 (347 residues) RPISFTNTKLTEKSKTIDQQRHTLAKATVDRSAQPKETAEERKARLNEWRAGRGRVLKRP PNSITIQPEPERQKENPVGSFWTTMAEEDEQRLFTDKVNKTFSECLNLINKGCPREEIMT TLNDLIKNIPDAKKLVKYWICLIRIESITSPIENIISIYERAVLAGAQPIEEMRQIIVDI ITMKTQEKSNCGGNVEDVYRTKEQIQEINIEDTSVDPELGKPEMENKHNRNVVFEDCEQQ QDDKKEPTDNFKTPETENRSSCLIKYNISTTPYLQSIKKKMQLDETNSAFKELKFLTPVR RSRRLQEKTSQLPDMLKDHYPCVSSLEQLSELGGETDAFVCRPNVAL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RPISFTNTKLTEKSKTIDQQRHTLAKATVDRSAQPKETAEERKARLNEWRAGRGRVLKRPPNSITIQPEPERQKENPVGSFWTTMAEEDEQRLFTDKVNKTFSECLNLINKGCPREEIMTTLNDLIKNIPDAKKLVKYWICLIRIESITSPIENIISIYERAVLAGAQPIEEMRQIIVDIITMKTQEKSNCGGNVEDVYRTKEQIQEINIEDTSVDPELGKPEMENKHNRNVVFEDCEQQQDDKKEPTDNFKTPETENRSSCLIKYNISTTPYLQSIKKKMQLDETNSAFKELKFLTPVRRSRRLQEKTSQLPDMLKDHYPCVSSLEQLSELGGETDAFVCRPNVAL | |||||||||||||||||||
1 | 3hotA | 0.05 | 0.02 | 0.50 | 0.71 | DisCoVER | QKQLAEQLEVSQVPHELERQMERRKNTCE------------LLSRYKR----SFLHRIVTGDEKWI------------FFVNPKR---------------K--KS--YVDPGQ---PA--TS--T-------AR--PNRFG--K------------KT-ML--CVWWDQ------S--------------------------------------------------GVIYYELLK-P---------GETVYQLLALQRKVIFLHDNPHAA-------------------Y-SPDLAPSDYHLFASMGHALAEQRFDVKEFYWRGIH-KL------PERWECVDGKY- | |||||||||||||
2 | 2x2hA | 0.04 | 0.03 | 0.67 | 0.67 | DEthreader | KVIKNFREGFYIVNGC-GTSEQYSYGWFMMNTGYMGAFDQHFVAFSLLQGKFEQKRSVM------------------------FFQGVVLAVDVDMQDLRVTCFLRNYTYILPDWRDVAEWWGNNYKKLFLDFVWQDM-TVPAMNKTYHP-----------------------------TDMRYENHGREPMVTQ--------------RKEGIVENADTLTKFRS--IGDIGGFYPCTGDLMVRY---VQAGCLLPWFR-----------------T-----------YQNAAFGKPIIKAASM-RAQNDHF-LLG--GHDGYRIAILPDGMCYLDSV-------- | |||||||||||||
3 | 4cgvA | 0.10 | 0.03 | 0.36 | 0.48 | CEthreader | -------------------------------------------------------------------------------------------HVDSQKALVLKEKGNKYFKQGK-YDEAIDCYTKGMDADPY---NPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSY-TKAYSRRGAARFALQKLEE-AKKDYERVLELEPNNFEATNELRKISQALASK----------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 4ui9C | 0.06 | 0.05 | 0.91 | 0.87 | EigenThreader | LDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAWLELCNLIKEFFLAHIYTELQLLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQDDTFSNLLYVRSM-KSELSYLAHNLCEIDKYRVETCCVIGNYYSLRS---QHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKEVNKRDYRAWYGLGQTYEILPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNCYWRAYAVGDVEKMALVKLAKLHEQL-------TESEQAAQCYIKYIQDIYSCE------STAFRYLAQYYFKCKLWDEASTCAQKCCAFN---------------DTRE | |||||||||||||
5 | 2ff4A | 0.10 | 0.06 | 0.66 | 0.39 | HHpred | --------------------------------------------ASRHLSAALR-EWRGPVLDDLR------------DFQFVE----PFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREP---LWTQLITAYYLSDRQSDALGAYRRVKTLGIDPGPTLRALNERILRQQPLDAKK-SAKTT-AA--G---TVTVLDRTMASGQQAVAYLHIAGYAATRIGRLHD-NDIVLD--SANVSRHVDTGTNYVINDLRSS----NG--------------------------VHVQHERIRSAVTLNDGDHI--------RIC--DHEFTFQIS--- | |||||||||||||
6 | 5lcwS | 0.13 | 0.05 | 0.42 | 0.55 | MRFsearch | --------------------------------------MSTLQGALAQESA-------------------------------CNNTLQQQKRAFEYEIRFYWDRYISWTEQNGKESNMSTLLERAVEALQIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQARVSRQTLL--------------------------------------------------------------------------------------------------------------------------------AVPQRSTLAELKSKGKNSRITVFDEN--- | |||||||||||||
7 | 2wviA | 0.09 | 0.04 | 0.40 | 0.79 | FFAS-3D | ----------------------------------------QQKRAFEY--EIRFYTGNDP------------------LDVWDRYISWTEQNYPQSNMSTLLERAVEALQGEYSDPRFLNLWLKLGRLCNEPLDMAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQARVSRQTLLALEKEEEEEV--------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 7abhu | 0.08 | 0.07 | 0.95 | 0.67 | SPARKS-K | PMRKAALRQITDKAREFGAGPLFNQILPLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYHKILVVIEPLLIDEDYYAREIISNLAKAAGLATMISTMRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGHLRSLVEIIEHGLV---DEQQKVRTISALAIAALAEAATPYGIESFDIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKH----FWQHRMALDRRNYRQLVDTTVELNKVG------------AAEIISRIVDDLKDEAEVMETIEKIMGNLGAADIDHKLEEQLI | |||||||||||||
9 | 5ctrA | 0.10 | 0.04 | 0.41 | 0.55 | CNFpred | ----------------------------------------EIWQAYLDYLRRR----------VDFKQDSSKELEELRAAFT------RALEYLKQEVCVIMQNWARIEARLCNMQKARELWDSIMTRG--NAKYANMWLEYYNLERAHGDTQHCRKALHRAVQCTSDYPEHVCEVLLTMERTEGSL-----EDWDIAVQKTETRLA-------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5u1sA | 0.07 | 0.05 | 0.69 | 0.83 | DEthreader | ---------------------------------------------------------------------PKRLSENVLLNVCMFVFDQVSSFEMDFVKMLLCYLNFN--NFDKLSIELSLCIKSKEKYYSSIVPY--ADNYLLEAYLYIALKNQLQKT-MNLSTAKIEQALLHASSLINVLWDSDLKLSEYMPKNVINRVHNMWQKVMSQLE-D---QKFDRIAAISKLKQMKELLEILSNLTDLPRHMPLFDKVLNN-------ISMILNPNG-LSRTESK-------N-YIGHGGEQYVRSKEIKKC--TK--IAPSFLLGCSSAANLWDVTDKDI--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |