Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | FARSKRGLRLKTVDSCFQDLKDSRLVEETFTVDEVTDMLDGLQTVVHSEVESELINTAYTNVLLLRQIFSQAEKWYLKLQTDISELENRELLEQVAEFEKSEFTSSNKKPSADLIKPKLAPLNEGGSELLNKEIARLQEENEKLKTRLKTIETQATTALGEKAKLEKSLKDLQMIQGDQKANVNQDITELENKVAALKCQFEKTLNDSTANQKSLEENLVTTKHDLLKVQDQLSTAEKELEKKFQQTAAYRNMKEILMKKNEQIKDLRKRLSK |
1 | 6ezvX | 0.08 | 0.05 | 0.71 | 0.64 | DisCoVER | | --------QL--NP--T-------------------------Q--QT--TQ-SAFLATTVITAQCHAILNTQ--FT-KLDSAKLVAKQ--WI-LGPQVSASIPSSVIVKGMNKELSDWGVKMQAAHDDLVNGATNIQ--DIESMNNAIDNNRAAIEKLN-IF--MLVAGV-AL--T--VATAGTAAA--VS--G--GI-AA--VGAAGV-TWGVLQNQIDDDYDSI-EDQQQIIALQ--G--LS--N-ASSAVV-SAIETSTSVLSDF-EAA- |
2 | 4av3A | 0.06 | 0.04 | 0.70 | 0.67 | DEthreader | | AFLLAVMASAGIVGMKMATRANVRV-A--ARKIGPALKVAYQGGSVMGLSVGGFALGLVLVYLFGGQVNLNIYTNINFVASSIILASTIALISYPIFFALVGLGCM---FLFYLKDLQ-----------------------------------S-GPGNTAAIGKGFAIGSAIFAALSLFASY---V--G--LAILTANSGGAWNAKKLVGDTVGDPLDTVGPSLILIKIMSVVSVIAVS--------------------------------- |
3 | 5j1iA | 0.11 | 0.11 | 0.99 | 0.61 | CEthreader | | KAQAEVEGLGKGVARLSAEAEKV--LALSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISE |
4 | 3jacA | 0.05 | 0.05 | 0.99 | 0.82 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFHDILHTKYRAATDVYALMFLADIVDIIFGFWAFGKHSAATDIASSLSDDQVPQAFLIDRALYLRKTVLGKLIHIWMFFILPAVTERMFSQNAVAQLKCIYFALSAYQIRCGYPTRILGNFLTKKYNHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSL |
5 | 4ll8E | 0.12 | 0.05 | 0.41 | 0.46 | HHpred | | -----------------------------------------------------------------------------------------------------------------------------MESKLLENLNLLKNENENLNSIFERKNKKLKELEKDYSELSNRYNEQKEKMDQLSKNSSAIEQSCSEKLQNMEVNYNSLLESQNLYRD-------HYSDEISKLNEKIGLLELELSNQNL---------------------------- |
6 | 2tmaA | 0.15 | 0.13 | 0.86 | 0.47 | MRFsearch | | ----AIKKKMQMLKLDKENALD--------RAEQAEADKKAAEDRSKQSLQKKLKGTYSEALKDAQEKLELAEKKATDAEADVASLNRRLVEEELDRAQER-------------------------LATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKVARKLVIIESDLERAEERAELSEGKLEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEELSDKLKEATRAEFAERSVTKLEKSIDDLEDELYA |
7 | 5xg2A | 0.15 | 0.12 | 0.82 | 1.40 | FFAS-3D | | ----------KGAIVRWGKRKEK-------LIEEIRAREEERNALVLGEIDRTFAVAREEFDTVVKELEEARKS-LYEGEARIKRAEEE-KERLKAEILTGE----------------------ARLPGLRERAENLRRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELEL----ARKDLEKVLAEERAVREEIEVA----KRRINELDTLIERERGELAKLRGRIERLERKRDKLKKANPEARELTEKIRAVEKEIAALREELSR |
8 | 6yvuB | 0.12 | 0.12 | 1.00 | 0.90 | SPARKS-K | | ETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISNMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERKNFTSAHLKLKEMQKVLNAHRQRAME |
9 | 5j1iA | 0.12 | 0.10 | 0.81 | 0.85 | CNFpred | | --VEGLGKGVARLSAEAEKVLAL-------AAPTLRSELELTLGKLEQV--RSLSAIYLEKLKTISLVIRGTQ-------------GAEEVLRAHEEQLKEAQAVPA----------------------TLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDV----EVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRESADPLGAWLQDARRRQEQ-REQLRQEQALLEEIERHGEKVEECQRFAKQ |
10 | 6yvuA | 0.10 | 0.06 | 0.64 | 0.83 | DEthreader | | I---V-----IVF-DN-TDK--SN------------SPIGFTNSPQ--IS-V--TR--Q-------------------------------GTSKYLIG--Q--VL--F-VQLNINNPIATKMFDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELH-KS-K--N------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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