>PF15282 (267 residues) DDFDVFTKAPFSKKVSQQDGQVVGTEPLLSPASPRSVDIFGCTPFQPSLLPKTGGSKEDL FGLVPFEEIAGSQQQKVKQQRNLQKLSSRQRRMKQEVSKNNGKRHHGTPTTTKKALKPSY RTPERARRHKKAGRRDSQSSNEFLTISDSKENISVALTDSKDRTNPLQTDESLLDPFGAK PFHPPDLMRHPQHQGFSDNRGDHGAVVVAGRPRQSSLHGAIHGGDGLKTDDFGAVPFTEL VVQSAQSQQQQALELDPFGAAPFPSKQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DDFDVFTKAPFSKKVSQQDGQVVGTEPLLSPASPRSVDIFGCTPFQPSLLPKTGGSKEDLFGLVPFEEIAGSQQQKVKQQRNLQKLSSRQRRMKQEVSKNNGKRHHGTPTTTKKALKPSYRTPERARRHKKAGRRDSQSSNEFLTISDSKENISVALTDSKDRTNPLQTDESLLDPFGAKPFHPPDLMRHPQHQGFSDNRGDHGAVVVAGRPRQSSLHGAIHGGDGLKTDDFGAVPFTELVVQSAQSQQQQALELDPFGAAPFPSKQ | |||||||||||||||||||
1 | 7chkC | 0.06 | 0.04 | 0.58 | 0.77 | DisCoVER | -GGELKIFFSSTPEFTRE-----------DLVEGKILASFKLDVLS---------GLGMGAMLM-------------------------------------------------TQIMSGHATIR-------------------VSAK-----VML------------SKFCSFALKLVYDELML-NS-DT---TDFGKIS-VLPGAIFSTQEEEFSFDFELFSPGHLKFDNKLLGKVHLAALSAPNLMPESFSCTFNFSIVDVKTT- | |||||||||||||
2 | 6j0tA | 0.06 | 0.06 | 0.97 | 0.56 | CEthreader | GPGSDDAGAFSGSMVIDYNNTSGFFNSSVDPRQRAVAVWTLSKGPSQAQHISYSLDGGYTFQHYSDNAVLDIN---SSNFRDPKVFWHEGRWIMAVAESQVFSVLFYSSPNLKNWTL----ESNFTHHGWTGTQYECPGLVKVPYDSVPDSAWVLFVSINPGGPLGGSVTQYFVGDFNGTHFTPIDDQTRFLDMGKDYYALQTFFNTPNEKDVYGIAWASNWQYAQQAPTDSMSLVRQFTLKDFSTNPNSADVVLNSQPVLNYDALR | |||||||||||||
3 | 4b7lA | 0.08 | 0.07 | 0.87 | 0.60 | EigenThreader | LQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLSIKLVSIDSKAIVDGNVWEKKQTPKQRLLGWIQNKI------------------PYLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAMQQADDWLGVPQVITYLSQFPKAKLK----PGAPLKPKLNPKKAVKQPISAGQGDVMVFVEDPNKEEAQVTPDSDKNKYLPKVTGLHKVTVLFAG--QHISKSP------------F | |||||||||||||
4 | 1u0kA | 0.09 | 0.07 | 0.76 | 0.28 | HHpred | WQLDVFAERPLTGNGLAVFDDASLDDAA-QAWTR-E---LRQSIFLLPGDPRTLEEELPFAGHPLL--GA----AALLHHLRGGD--N-EQHWTLHLA--SKSVVAGSGFYAEDQGRAEFGATRWFA--EAFSLSAVSTGLPYLLVTAALGRARQVN-D----LQEAL-DK--LGAAFVYLLDVDG--REGRTWDN-LGLVE--------DVATGSAAGPVAAEYG-LAA--RG---EPFVLHQG---------------------- | |||||||||||||
5 | 2pffB | 0.17 | 0.03 | 0.15 | 0.48 | MRFsearch | -----------DYGFKQGGGGGGGGGGG------------------------------------------GMGMDLYKTSKAAQDVWNRADNH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 2xd8A | 0.10 | 0.09 | 0.98 | 0.52 | FFAS-3D | KSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVM-----DDLLISSAFVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNRVGSGTNESDAFTASALVNAFYDAAAAMDEKGVSSQGRCAVLNPRQYYASNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVIYQGDAMGADYLNPA- | |||||||||||||
7 | 6buaA | 0.07 | 0.07 | 0.99 | 1.05 | SPARKS-K | LPRVGEICYAYEIFLEPQFESCEYTEHMYLNLTPRNYAILLRNKLPRLAEMPNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLDRRSKENVPLILGEQKCFDWELMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIVTQWYANYDKPMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYG---NRIGDVVHKDKFMIEVRDLTEQLTFYVHNVILIPELCFNFNFPGDLWLKLIFLPSILNRMYFLL | |||||||||||||
8 | 6ogdB | 0.18 | 0.04 | 0.21 | 0.32 | CNFpred | ---------------------------------------------------------------------------------------------------------------------PNYRFEPMLNRSKSGVETLIQFGSTLLSLLERKDSLSFDAYQMIQSGDLYRFSIDL---------------------------------------------------------------------------------------------- | |||||||||||||
9 | 6lodB | 0.04 | 0.03 | 0.68 | 0.67 | DEthreader | ---------EG-P--D-------------------LGST------------------------ASITGARCVVLVGESQPP-HPSGGIAALSALTQEMNAGTVEKVPLSMHVGLNGAHLAWGDTTTIVTWQQDFVFWNTALHDG----S-WDGAFNRTAAGNNVGFNAYR----AVVACQSENNINMVYNRCVGTKYCSNNCPYKVRR-FNFLQYQDVP------------M-N-C-REA-QA--E-R-RIADGEIMTACQIVVSYL | |||||||||||||
10 | 6etxG | 0.11 | 0.11 | 1.00 | 0.79 | MUSTER | NHPELFERQETWSPFHISLKPYHISGQIRVFNHSRDRWLRVLSPFAPSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |