Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | FQITPETPGGLPVLNPFESPSDYHSLQETVFASPNIFTSSKTASTSSSTPGKFRWSIDQIAIINPVEIDPEDIRRQALYMSCTGVDTEIEDRRQKAIEDFFTKSVIVPSPWTQHEGKPVSQFHSTKRIDVNSVSPADREIHVQPGKNHESISRLELGDQNCTQYSKCRYNAACQTLLSLPVDFNLEKILGEYFRSGEPADQSQESMSSFSLRRKLFLDGNGSGSESSSP |
1 | 1ddoA1 | 0.05 | 0.03 | 0.65 | 0.81 | DisCoVER | | ----------MRVVVIGAGVIGLSTAIHLDVKVYAD--------------------RFTPFTTTDV----------------------------------------AAGLWQPYTSENQTFLLNMGLTPVSGYNLFREAVDPY---WKDMVLGFRKLLFPDYRYGWFNTSLILEGRKYLFFGADV--II--NCTGVWAPVRLERIHNYGHGGY-GLTI--HWGCALEV- |
2 | 6b0jA | 0.05 | 0.03 | 0.67 | 0.67 | DEthreader | | -----QK--PNIILIVADD---------------LGYADVGFNGDDAKSGTSFDAYVAHSGPSRLMISLYFTGNGFDEYLNGKEVKETQIDALSRAVRGVGKV-IVFMSRVHPNHKDEPIYALRHRKGYSDAAIR-MNQWKALKQQPWQLFIDISEKHDVSSNKLTDMV----------------------------PSWFHET-E----------------------- |
3 | 1vt4I3 | 0.05 | 0.05 | 1.00 | 0.92 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6w09E | 0.04 | 0.03 | 0.82 | 0.57 | EigenThreader | | ----NFNVYKAIRPYLSCHSPVASLQIGIKKLRYMDNVRTSAPCTCPKGETLTVGF---TDSGKISHSCTHQ-------STAATAEE----------------IEVHMPPDTMSQQSGNVKITVNSQTVRYKCNCGDSNEGLTTTDKVINNCK-------VDQCHAAVTNHKKWQYNVHIPFPLR-----VPKARNPTVTYGMLLYPDHPTLLSYRNMGEEPNYPTEGL |
5 | 1mu2A | 0.11 | 0.07 | 0.58 | 0.38 | HHpred | | ------------------------------------------------------------AKVEPIKIMLKPGK-DGPKLRQWPLTKEKIEALKEICEKMEKEGQLEPNPYNTPTFAIKKRMRELNKVTQEIQLGIPHPAGLAKKR---RITVLDVGDA-YFSI-PLHEDFRPYTAFTLPQGWTMRQVLEPFRQYMDDI------------------------------ |
6 | 1xu8B1 | 0.11 | 0.05 | 0.42 | 0.47 | MRFsearch | | --------------------DLFKQLCENVLFSPICLSTS-------------------LSLAQVGA--KGDTANEIGQVLHFENVKDVPFGFQTVTSDVNKL--------------------------------------------------------------SSFYSLKLIKRLYVNLSTEFISSTKRPYAKELET------------------------------ |
7 | 4bmlA | 0.10 | 0.09 | 0.91 | 0.40 | FFAS-3D | | VRYATALKLSGEVFTAFNNASIFKGLVRKSKQFMFTGPGTPIVGDAGIKANEKTLVMDDLLV-SSQFVYS-----LDEIFSQYSTRAEVSKQIGEALATHYDERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGR-------------VAVLSPR-QYYSLISTNILNREIGNSQGDMNSGKGLYSRILKSNNLAGLYGQD- |
8 | 5yfpE | 0.08 | 0.08 | 0.94 | 0.85 | SPARKS-K | | FGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSP--------NSPANYSLNCVVESTARVMELIPNKAHLYILEILKIMFLGIVDSYMAYWKICKVDINKTAGVVNLDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQKMEILINIILQ-----ETITVISTKFSAILCKQFVPKSQELLDQDTLPAIEIVNIL-NLIFEQSSKFLKG |
9 | 1oyzA | 0.06 | 0.01 | 0.21 | 0.38 | CNFpred | | -------------------------------------------------------GAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKK------------------------------------------------------------------------------------------------------------------------------ |
10 | 4zhjA | 0.09 | 0.07 | 0.76 | 0.67 | DEthreader | | EKAARFMLFQYPL--IGLIM-QRTHLVTGDDAHYGPLVFQ--------HP-QVAQIEPIIRLEAQRKWAVLHLYYTISYLEPGGDRNAKTYESLAQIMWMVAIDVVVNCSGV-R------V-FVRKHAL-EQ--------AEEMGIGVREAA---------------NDMFELKATFQNL--DSSEISLTDVSHMEGVRELSKRLVNTMGWSAT-AG-------NGRGY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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