Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MQENDLFKAEFILITDSGDEDEAAAASINIQRPSNGYGPPKPLSPPSLYGSSSTICSVNEPCTQISSRGYLAKSQAPQRYRGQQYKIKTSYKAFAAIPTNTLLMEQKALEEPTKTASVIEGTALDTHSEMCSPAQLRQQTEELCAVIDQVLQDPLTMMNTESDGGKVGPLNMDSSETDKVSSTLQRAAGRETRYANLYKSTPMVAESQMTKPGVIRPVLVKAKSAQQKEEPYQPNPFKKYLEEISDQDIEQ |
1 | 3niwA | 0.08 | 0.06 | 0.66 | 0.68 | DisCoVER | | -------KYKLIVLDL-----------DGTLTNSKKISRNRLIRLVLASGRPTYGIVNEFGGFILSYNGGEIINWES-----EYENV-LPNEVVPLYALSILTYDAEIVTENSLDPYVQKEAFLNKA-IRE-TNDF---LTDIT--L---P--------------------------------VA-KCLIVGDALELC--KINVFRSEPYFLELVPEVIAIGDDTNDEDGVAAI----------------- |
2 | 3o0rB | 0.04 | 0.03 | 0.76 | 0.83 | DEthreader | | ----------------SQAVAKPYFVFLILFVQILF------TNLLIVWLFGM-ILFWVF----FLKAIVIVALGFLFNVGMLLALFWWVHLWVGVWELIMGAILAFVLVKITGV-D---------REV-IE-KWLYVIIAMALISGIIGTGHHYF--WI---GVP-------GYWLWLGSVFSALEPLPFFAMVLFAFIVALAMGTTVFLGAAFAYIVTIISME-WGLMTVMVITLLSA-GV-------- |
3 | 1vt4I3 | 0.05 | 0.05 | 1.00 | 0.64 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5nnpA | 0.06 | 0.06 | 0.97 | 0.52 | EigenThreader | | AAEQILKKN-------PKHGDTMSMKALILNAQGKTEEAFALAKEALTIDMKSYICWHVYGILYRTNKNFDEAIKAYKFALSHQIQRDLAVLQIQMRDYAGYVQSRLNMLKARPQIRQNWTALAIAYHLEGNLEKAEHILTTYEKSLYLNEYGKGAALYYLAQHYNYYMSRDLTRALEYVEKAIELDPKNVDFHMTKARIFKHQGDSLDPKDRYINSKAAKYQLRNNELFTRAQCIWFLTEDGEAWQRRGN |
5 | 2pffA1 | 0.16 | 0.13 | 0.82 | 0.45 | HHpred | | --KYVLITAKVVVTTSRFS-KQVTDY---YQSIYAKYGAKGSTLIPFNQGSKQDVEAYDTEKNGGLDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMG-----------------------CVKKQKS-------A--RGIETRPAQVILPMSPNHGTFGGDGMYSESLSLETLFNRWANQLTVCGAIIGWT---RGTGLMSANNIIKMGVRTFGTPEVVELCQKSPLRKELVETSEVR--- |
6 | 2pffB | 0.08 | 0.04 | 0.44 | 0.60 | MRFsearch | | -------GVRVIVAGTLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGMG------------------------------------------MDLYKTSKAAQDVWNRADNHFKDTYGFSIL------------------------------------------------------------------------------------------- |
7 | 4bmlA | 0.12 | 0.09 | 0.75 | 0.40 | FFAS-3D | | ----KLFSGE---VFTAFNNASIFKGLVRSYDLRGG-KSKQFMFTGKLSAGYHTPGTPIVGDAGIKANEK------------------------------TLVMDDLLVSSQFVYSLDEIFSQYST-----RAEVSKQIGEALATHYDERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAI------VDGFFEAAAVLDERSAPQEGVLSP-RQYYSLISSVDTNILNREI-------------- |
8 | 2blmA | 0.10 | 0.09 | 0.92 | 0.92 | SPARKS-K | | LEEQFDAKLGIFALDTGTNR---------TVAYRPDERFAFASTIKALTVGVLLQKSIEDLNQRITYTRDDLVNPITEKHVDTGMTLKELADASLRYSDNNLILKQESLKKELRKIGDEVTNPERFEPELNEVNPGETQARALVTSLRAFALEDKLPSEKRNTTGDALIRAGVPDGWEVADKTGAASYGTRNDIAIIWPPKGD------------PVVLAVLSSRDKKDAKYDDKLIAEATKVVMKALNMN |
9 | 1moqA | 0.23 | 0.05 | 0.22 | 0.46 | CNFpred | | -----------------------------------------------------------------------------------------STKAFTTQLTVLLMLVAKLSRLKGLDASI--------------EHDIVHGLQALPSRIEQMLSQDKRIEA-------------------------------------------------------------------------------------------- |
10 | 6um1A | 0.05 | 0.04 | 0.75 | 0.67 | DEthreader | | --------SCSLSSAQ--HDVAVRYSGLTLINFFTWDTKACVHEKEA--FRVLQTARE---CDRARWYTSYACRYASAGVAI--LYT----DSGYV-FDLNPLNNNVCG-DMPACGT-L--D-KPAVGLEYTDAFIIRFVEFETALACVPPTAVNLGNGDKCKNQR--FS-TRINLFLWRSNVTNPGHLFDLSLLFVCRPEVGPHTPLA-PACPAGTV-G----------------D-------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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