Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TRARNQGAEGSRGRGLGRTPSMQMAISSDSARKGAREPQSPGLVPGPVPHRPMGGPVEVGWDYAQWKQEREQIDLARVARHRDAQGDWRRPWDLDKAKPTLQDSGKPWEEGPARVGSTKGPRSHRKSQPPPLSLDGKGGTTRGGQPSRPSVVSATRSKARGTERLTGRARRWETKEDKEE |
1 | 2nbiA2 | 0.06 | 0.03 | 0.47 | 0.74 | DisCoVER | | ------QPSSQPSE--CADVLELCPYDT-------------------------------------C--FL--P--------------FD--DS-SRP-PDCTDPSVNRPDCDKLSTCTCCPTQ----------------------------CRNPMSPSPDGSPPVCSPTMMPSPLPSP- |
2 | 2wwbA | 0.02 | 0.02 | 0.79 | 0.83 | DEthreader | | --WTAITLFILVCCQ--------VILAVTSGLIMQKGLIVFITNCETITVFAVYFQFRLFYSNIPIILQSALVSNLYVIS-SGGARAYHYLSAVYIVFML-----------------G-CAFFSKTWIEVSGSS-A---DVAKQL-----AAGGLGASVADASGTGILLAVTIIQYFEIF |
3 | 4kmqA | 0.07 | 0.07 | 0.99 | 0.44 | CEthreader | | TVQPTERSPRDPKAGEDVILNITTWPIENGQDVWVEWTKNGVAQENVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNTATAGDF-SPKLYLSFEDLDTLRELSPTGKETGHAGKSGYTVEDTAEKVTVTTEDLSIEIQ |
4 | 5cwsE | 0.05 | 0.05 | 0.95 | 0.52 | EigenThreader | | PIPEQIKLIVDKWNPNHPNCAFKTYLYNKV-----DEHTVPLYGPGPNEDPKEWEEALQRKFPSIVARLNKLHQINASLDAIL----SRHDLDHTVRAFNARRRHAELSRRCLHLAARVQVLRNRGYALSGDEDELKQKLQQIDKTLNDPAQGSRLEELWSRLIVLRGYAEDLKDQINQA |
5 | 2xu8A | 0.18 | 0.06 | 0.31 | 0.28 | HHpred | | --------QGQQPWQF-QRLAAHLALTEQALRASIVAPLKRGGVY----------PESYQFAYRQWQERQAAGQ---------------------------------------------------------------------------------------------------------- |
6 | 2pffA1 | 0.18 | 0.12 | 0.66 | 0.80 | MRFsearch | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVT-------------- |
7 | 7aavK | 0.15 | 0.09 | 0.61 | 0.45 | FFAS-3D | | ---------------------------------------------------------NDEEEYEAWKRDREDREKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYT-------------- |
8 | 6em5m | 0.13 | 0.12 | 0.91 | 1.19 | SPARKS-K | | QRNEQTDDSINP--------------YEPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAKRVMKIVRAIREKKLKEMKEKEKIENYQYDLWDSTETNDHVMHLRAPKLPPPTNEESYNPPEEYLLSPEENTEYSERERNFIPQKYSALRKVPGYGE--SIRERLAPRVRKNKLNIDPNS |
9 | 5h2dA | 0.11 | 0.02 | 0.20 | 0.28 | CNFpred | | ------------------------------------------------------------DEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKE------------------------------------------------------------------------------------ |
10 | 4zhjA | 0.04 | 0.03 | 0.83 | 0.83 | DEthreader | | ------------DLRKKPKDKKVAITVFSFPPDKG----A--AYLDVFSIVMGLQDVFGNVFIG--VQP-TF--GYEGD-PM----RLLFSSASPHHGAYYYNHWKADAVIPNLYGASTISYLTPPPSEAIAVQEQINADVFVSFEYLFCPIVSEIDVSHYFDNMGSAEVRGYWETS-N- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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